Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.81■□□□□ 0.6
ITGA8P53708 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
ITGA8P53708 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ITGA8P53708 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ITGA8P53708 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ITGA8P53708 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ITGA8P53708 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.81■□□□□ 0.6
ITGA8P53708 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ITGA8P53708 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ITGA8P53708 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.81■□□□□ 0.6
ITGA8P53708 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
ITGA8P53708 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.81■□□□□ 0.6
ITGA8P53708 AC128676.1-201ENST00000454392 318 ntBASIC18.81■□□□□ 0.6
ITGA8P53708 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ITGA8P53708 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.81■□□□□ 0.6
ITGA8P53708 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.81■□□□□ 0.6
ITGA8P53708 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.81■□□□□ 0.6
ITGA8P53708 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.81■□□□□ 0.6
ITGA8P53708 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
ITGA8P53708 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ITGA8P53708 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ITGA8P53708 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.81■□□□□ 0.6
ITGA8P53708 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ITGA8P53708 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ITGA8P53708 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ITGA8P53708 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ITGA8P53708 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ITGA8P53708 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.8■□□□□ 0.6
ITGA8P53708 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.8■□□□□ 0.6
ITGA8P53708 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ITGA8P53708 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ITGA8P53708 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ITGA8P53708 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ITGA8P53708 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ITGA8P53708 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ITGA8P53708 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ITGA8P53708 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ITGA8P53708 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ITGA8P53708 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.8■□□□□ 0.6
ITGA8P53708 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ITGA8P53708 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.8■□□□□ 0.6
ITGA8P53708 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.8■□□□□ 0.6
ITGA8P53708 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.8■□□□□ 0.6
ITGA8P53708 RARRES2P10-201ENST00000564312 460 ntBASIC18.8■□□□□ 0.6
ITGA8P53708 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ITGA8P53708 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ITGA8P53708 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
ITGA8P53708 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ITGA8P53708 AL645608.8-201ENST00000606034 2086 ntBASIC18.8■□□□□ 0.6
ITGA8P53708 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ITGA8P53708 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ITGA8P53708 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ITGA8P53708 SDHAP2-201ENST00000455183 2001 ntBASIC18.79■□□□□ 0.6
ITGA8P53708 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ITGA8P53708 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA8P53708 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.79■□□□□ 0.6
ITGA8P53708 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.79■□□□□ 0.6
ITGA8P53708 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA8P53708 FSCN1P1-201ENST00000568912 1481 ntBASIC18.79■□□□□ 0.6
ITGA8P53708 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ITGA8P53708 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.79■□□□□ 0.6
ITGA8P53708 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.79■□□□□ 0.6
ITGA8P53708 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA8P53708 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA8P53708 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA8P53708 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA8P53708 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA8P53708 KRT18P29-201ENST00000397031 1267 ntBASIC18.79■□□□□ 0.6
ITGA8P53708 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA8P53708 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.79■□□□□ 0.6
ITGA8P53708 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA8P53708 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA8P53708 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA8P53708 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.79■□□□□ 0.6
ITGA8P53708 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA8P53708 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ITGA8P53708 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ITGA8P53708 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.79■□□□□ 0.6
ITGA8P53708 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA8P53708 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA8P53708 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA8P53708 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.78■□□□□ 0.6
ITGA8P53708 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
ITGA8P53708 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA8P53708 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA8P53708 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA8P53708 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.78■□□□□ 0.6
ITGA8P53708 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA8P53708 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA8P53708 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.78■□□□□ 0.6
ITGA8P53708 RPPH1-201ENST00000516869 333 ntBASIC18.78■□□□□ 0.6
ITGA8P53708 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.78■□□□□ 0.6
ITGA8P53708 ITM2C-210ENST00000620962 501 ntBASIC18.78■□□□□ 0.6
ITGA8P53708 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA8P53708 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA8P53708 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.78■□□□□ 0.6
ITGA8P53708 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA8P53708 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA8P53708 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ITGA8P53708 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms