Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC26.11■■□□□ 1.77
CLTCL1P53675 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC26.11■■□□□ 1.77
CLTCL1P53675 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CLTCL1P53675 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CLTCL1P53675 AP005117.1-201ENST00000584346 1413 ntBASIC26.11■■□□□ 1.77
CLTCL1P53675 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CLTCL1P53675 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
CLTCL1P53675 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC26.11■■□□□ 1.77
CLTCL1P53675 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CLTCL1P53675 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
CLTCL1P53675 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC26.1■■□□□ 1.77
CLTCL1P53675 ABCD1P5-201ENST00000445663 754 ntBASIC26.1■■□□□ 1.77
CLTCL1P53675 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CLTCL1P53675 AC012640.2-201ENST00000561606 901 ntBASIC26.1■■□□□ 1.77
CLTCL1P53675 AC021087.4-201ENST00000563761 564 ntBASIC26.1■■□□□ 1.77
CLTCL1P53675 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC26.1■■□□□ 1.77
CLTCL1P53675 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC26.1■■□□□ 1.77
CLTCL1P53675 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CLTCL1P53675 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CLTCL1P53675 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CLTCL1P53675 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CLTCL1P53675 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
CLTCL1P53675 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
CLTCL1P53675 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CLTCL1P53675 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC26.1■■□□□ 1.77
CLTCL1P53675 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC26.1■■□□□ 1.77
CLTCL1P53675 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CLTCL1P53675 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC26.1■■□□□ 1.77
CLTCL1P53675 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
CLTCL1P53675 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC26.1■■□□□ 1.77
CLTCL1P53675 FAM215A-202ENST00000632077 792 ntBASIC26.1■■□□□ 1.77
CLTCL1P53675 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CLTCL1P53675 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC26.1■■□□□ 1.77
CLTCL1P53675 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CLTCL1P53675 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC26.1■■□□□ 1.77
CLTCL1P53675 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CLTCL1P53675 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC26.09■■□□□ 1.77
CLTCL1P53675 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC26.09■■□□□ 1.77
CLTCL1P53675 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC26.09■■□□□ 1.77
CLTCL1P53675 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC26.09■■□□□ 1.77
CLTCL1P53675 CSF3-203ENST00000394148 622 ntTSL 3 BASIC26.09■■□□□ 1.77
CLTCL1P53675 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC26.09■■□□□ 1.77
CLTCL1P53675 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC26.09■■□□□ 1.77
CLTCL1P53675 AC025062.2-201ENST00000605477 670 ntBASIC26.09■■□□□ 1.77
CLTCL1P53675 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CLTCL1P53675 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CLTCL1P53675 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
CLTCL1P53675 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CLTCL1P53675 AL031598.1-201ENST00000561511 1773 ntBASIC26.08■■□□□ 1.77
CLTCL1P53675 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
CLTCL1P53675 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC26.08■■□□□ 1.77
CLTCL1P53675 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC26.08■■□□□ 1.77
CLTCL1P53675 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CLTCL1P53675 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
CLTCL1P53675 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
CLTCL1P53675 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CLTCL1P53675 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CLTCL1P53675 AC106730.1-201ENST00000566722 1090 ntBASIC26.08■■□□□ 1.77
CLTCL1P53675 AL139288.1-201ENST00000623748 933 ntBASIC26.08■■□□□ 1.77
CLTCL1P53675 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CLTCL1P53675 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CLTCL1P53675 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
CLTCL1P53675 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC26.08■■□□□ 1.76
CLTCL1P53675 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.76
CLTCL1P53675 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC26.08■■□□□ 1.76
CLTCL1P53675 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CLTCL1P53675 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CLTCL1P53675 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC26.07■■□□□ 1.76
CLTCL1P53675 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
CLTCL1P53675 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC26.07■■□□□ 1.76
CLTCL1P53675 RNPS1P1-201ENST00000507437 918 ntBASIC26.07■■□□□ 1.76
CLTCL1P53675 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC26.07■■□□□ 1.76
CLTCL1P53675 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC26.07■■□□□ 1.76
CLTCL1P53675 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
CLTCL1P53675 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CLTCL1P53675 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CLTCL1P53675 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CLTCL1P53675 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC26.07■■□□□ 1.76
CLTCL1P53675 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
CLTCL1P53675 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CLTCL1P53675 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CLTCL1P53675 AC007967.3-201ENST00000434308 558 ntBASIC26.06■■□□□ 1.76
CLTCL1P53675 KRT18P58-201ENST00000527480 1120 ntBASIC26.06■■□□□ 1.76
CLTCL1P53675 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC26.06■■□□□ 1.76
CLTCL1P53675 PRKN-208ENST00000610470 531 ntTSL 2 BASIC26.06■■□□□ 1.76
CLTCL1P53675 PRKN-209ENST00000612485 225 ntTSL 5 BASIC26.06■■□□□ 1.76
CLTCL1P53675 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
CLTCL1P53675 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC26.06■■□□□ 1.76
CLTCL1P53675 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CLTCL1P53675 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
CLTCL1P53675 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC26.06■■□□□ 1.76
CLTCL1P53675 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CLTCL1P53675 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CLTCL1P53675 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CLTCL1P53675 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CLTCL1P53675 ESPNP-201ENST00000270691 2015 ntBASIC26.06■■□□□ 1.76
CLTCL1P53675 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC26.06■■□□□ 1.76
CLTCL1P53675 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC26.06■■□□□ 1.76
CLTCL1P53675 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC26.06■■□□□ 1.76
CLTCL1P53675 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC26.06■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms