Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PDX1P52945 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDX1P52945 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDX1P52945 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
PDX1P52945 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PDX1P52945 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.77■□□□□ 0.44
PDX1P52945 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
PDX1P52945 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDX1P52945 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDX1P52945 FP475955.4-201ENST00000623131 1990 ntBASIC17.77■□□□□ 0.44
PDX1P52945 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
PDX1P52945 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.77■□□□□ 0.44
PDX1P52945 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDX1P52945 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.77■□□□□ 0.44
PDX1P52945 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDX1P52945 AC006333.2-201ENST00000607957 2099 ntBASIC17.77■□□□□ 0.44
PDX1P52945 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PDX1P52945 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDX1P52945 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.77■□□□□ 0.44
PDX1P52945 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.77■□□□□ 0.44
PDX1P52945 AL160237.2-201ENST00000556165 472 ntBASIC17.77■□□□□ 0.44
PDX1P52945 AC090616.6-201ENST00000582640 721 ntBASIC17.77■□□□□ 0.44
PDX1P52945 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDX1P52945 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PDX1P52945 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDX1P52945 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDX1P52945 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PDX1P52945 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDX1P52945 FEM1AP3-201ENST00000403722 1741 ntBASIC17.77■□□□□ 0.44
PDX1P52945 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
PDX1P52945 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDX1P52945 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDX1P52945 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDX1P52945 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
PDX1P52945 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDX1P52945 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDX1P52945 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
PDX1P52945 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.77■□□□□ 0.43
PDX1P52945 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PDX1P52945 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PDX1P52945 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.76■□□□□ 0.43
PDX1P52945 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.76■□□□□ 0.43
PDX1P52945 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDX1P52945 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDX1P52945 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDX1P52945 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDX1P52945 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDX1P52945 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDX1P52945 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.76■□□□□ 0.43
PDX1P52945 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDX1P52945 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDX1P52945 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDX1P52945 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.76■□□□□ 0.43
PDX1P52945 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.76■□□□□ 0.43
PDX1P52945 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDX1P52945 LINC00167-201ENST00000530583 1419 ntBASIC17.76■□□□□ 0.43
PDX1P52945 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PDX1P52945 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDX1P52945 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.76■□□□□ 0.43
PDX1P52945 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PDX1P52945 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.76■□□□□ 0.43
PDX1P52945 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.76■□□□□ 0.43
PDX1P52945 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.76■□□□□ 0.43
PDX1P52945 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.76■□□□□ 0.43
PDX1P52945 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.76■□□□□ 0.43
PDX1P52945 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PDX1P52945 AC138894.3-201ENST00000603787 634 ntBASIC17.76■□□□□ 0.43
PDX1P52945 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.76■□□□□ 0.43
PDX1P52945 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDX1P52945 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDX1P52945 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDX1P52945 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDX1P52945 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDX1P52945 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDX1P52945 AC233702.3-201ENST00000578656 1387 ntBASIC17.76■□□□□ 0.43
PDX1P52945 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDX1P52945 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.76■□□□□ 0.43
PDX1P52945 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDX1P52945 AC034236.2-201ENST00000606662 1610 ntBASIC17.76■□□□□ 0.43
PDX1P52945 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDX1P52945 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDX1P52945 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDX1P52945 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDX1P52945 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.75■□□□□ 0.43
PDX1P52945 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.75■□□□□ 0.43
PDX1P52945 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDX1P52945 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDX1P52945 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
PDX1P52945 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
PDX1P52945 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.75■□□□□ 0.43
PDX1P52945 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDX1P52945 AC104819.1-201ENST00000504587 486 ntBASIC17.75■□□□□ 0.43
PDX1P52945 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDX1P52945 AP002469.2-201ENST00000531724 424 ntBASIC17.75■□□□□ 0.43
PDX1P52945 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDX1P52945 AC074051.2-201ENST00000565115 352 ntBASIC17.75■□□□□ 0.43
PDX1P52945 MIR3180-4-201ENST00000582223 153 ntBASIC17.75■□□□□ 0.43
PDX1P52945 SLC25A6P4-201ENST00000586535 553 ntBASIC17.75■□□□□ 0.43
PDX1P52945 GPR32P1-201ENST00000601788 811 ntBASIC17.75■□□□□ 0.43
PDX1P52945 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms