Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLCNKAP51800 SDHAP2-201ENST00000455183 2001 ntBASIC17.94■□□□□ 0.46
CLCNKAP51800 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLCNKAP51800 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
CLCNKAP51800 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLCNKAP51800 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLCNKAP51800 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLCNKAP51800 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLCNKAP51800 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLCNKAP51800 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLCNKAP51800 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CLCNKAP51800 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLCNKAP51800 AC016734.2-201ENST00000624325 1377 ntBASIC17.93■□□□□ 0.46
CLCNKAP51800 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
CLCNKAP51800 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCNKAP51800 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
CLCNKAP51800 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLCNKAP51800 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCNKAP51800 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCNKAP51800 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCNKAP51800 IGHGP-201ENST00000390555 1178 ntBASIC17.93■□□□□ 0.46
CLCNKAP51800 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.93■□□□□ 0.46
CLCNKAP51800 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.93■□□□□ 0.46
CLCNKAP51800 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.93■□□□□ 0.46
CLCNKAP51800 AL390719.2-201ENST00000606993 987 ntBASIC17.93■□□□□ 0.46
CLCNKAP51800 NPAP1P7-201ENST00000613027 823 ntBASIC17.93■□□□□ 0.46
CLCNKAP51800 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCNKAP51800 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.93■□□□□ 0.46
CLCNKAP51800 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCNKAP51800 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCNKAP51800 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCNKAP51800 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCNKAP51800 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCNKAP51800 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.93■□□□□ 0.46
CLCNKAP51800 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.93■□□□□ 0.46
CLCNKAP51800 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLCNKAP51800 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCNKAP51800 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLCNKAP51800 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLCNKAP51800 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.92■□□□□ 0.46
CLCNKAP51800 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CLCNKAP51800 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLCNKAP51800 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
CLCNKAP51800 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLCNKAP51800 LETM1P2-201ENST00000597330 2178 ntBASIC17.92■□□□□ 0.46
CLCNKAP51800 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
CLCNKAP51800 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CLCNKAP51800 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.92■□□□□ 0.46
CLCNKAP51800 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLCNKAP51800 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLCNKAP51800 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLCNKAP51800 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.92■□□□□ 0.46
CLCNKAP51800 TSPY22P-201ENST00000427496 604 ntBASIC17.92■□□□□ 0.46
CLCNKAP51800 TSSC2-201ENST00000450217 709 ntBASIC17.92■□□□□ 0.46
CLCNKAP51800 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.92■□□□□ 0.46
CLCNKAP51800 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
CLCNKAP51800 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.92■□□□□ 0.46
CLCNKAP51800 AC113404.2-201ENST00000507884 177 ntBASIC17.92■□□□□ 0.46
CLCNKAP51800 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.92■□□□□ 0.46
CLCNKAP51800 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.92■□□□□ 0.46
CLCNKAP51800 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.92■□□□□ 0.46
CLCNKAP51800 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.92■□□□□ 0.46
CLCNKAP51800 AC005332.3-201ENST00000589904 676 ntBASIC17.92■□□□□ 0.46
CLCNKAP51800 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCNKAP51800 GPR32P1-201ENST00000601788 811 ntBASIC17.92■□□□□ 0.46
CLCNKAP51800 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLCNKAP51800 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCNKAP51800 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCNKAP51800 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLCNKAP51800 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.92■□□□□ 0.46
CLCNKAP51800 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLCNKAP51800 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CLCNKAP51800 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.91■□□□□ 0.46
CLCNKAP51800 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLCNKAP51800 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.91■□□□□ 0.46
CLCNKAP51800 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLCNKAP51800 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCNKAP51800 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCNKAP51800 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCNKAP51800 WIZP1-201ENST00000531444 2299 ntBASIC17.91■□□□□ 0.46
CLCNKAP51800 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
CLCNKAP51800 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLCNKAP51800 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CLCNKAP51800 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CLCNKAP51800 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.91■□□□□ 0.46
CLCNKAP51800 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCNKAP51800 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.91■□□□□ 0.46
CLCNKAP51800 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CLCNKAP51800 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLCNKAP51800 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.91■□□□□ 0.46
CLCNKAP51800 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.91■□□□□ 0.46
CLCNKAP51800 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.91■□□□□ 0.46
CLCNKAP51800 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.91■□□□□ 0.46
CLCNKAP51800 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.91■□□□□ 0.46
CLCNKAP51800 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.91■□□□□ 0.46
CLCNKAP51800 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.91■□□□□ 0.46
CLCNKAP51800 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CLCNKAP51800 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLCNKAP51800 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.91■□□□□ 0.46
CLCNKAP51800 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms