Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.08■□□□□ 0.81
CLCN3P51790 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.08■□□□□ 0.81
CLCN3P51790 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
CLCN3P51790 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLCN3P51790 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.08■□□□□ 0.81
CLCN3P51790 TSPY12P-201ENST00000421279 868 ntBASIC20.08■□□□□ 0.81
CLCN3P51790 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.08■□□□□ 0.81
CLCN3P51790 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.08■□□□□ 0.81
CLCN3P51790 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.08■□□□□ 0.81
CLCN3P51790 VENTXP7-201ENST00000475503 772 ntBASIC20.08■□□□□ 0.81
CLCN3P51790 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.08■□□□□ 0.81
CLCN3P51790 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLCN3P51790 AC091304.2-201ENST00000564639 760 ntBASIC20.08■□□□□ 0.81
CLCN3P51790 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CLCN3P51790 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLCN3P51790 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.08■□□□□ 0.8
CLCN3P51790 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
CLCN3P51790 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.08■□□□□ 0.8
CLCN3P51790 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLCN3P51790 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CLCN3P51790 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLCN3P51790 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CLCN3P51790 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN3P51790 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN3P51790 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN3P51790 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN3P51790 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN3P51790 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN3P51790 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN3P51790 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN3P51790 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN3P51790 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN3P51790 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.07■□□□□ 0.8
CLCN3P51790 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN3P51790 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.07■□□□□ 0.8
CLCN3P51790 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.07■□□□□ 0.8
CLCN3P51790 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.07■□□□□ 0.8
CLCN3P51790 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN3P51790 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.07■□□□□ 0.8
CLCN3P51790 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.07■□□□□ 0.8
CLCN3P51790 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN3P51790 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN3P51790 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CLCN3P51790 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.07■□□□□ 0.8
CLCN3P51790 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN3P51790 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN3P51790 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN3P51790 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN3P51790 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.07■□□□□ 0.8
CLCN3P51790 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN3P51790 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLCN3P51790 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.06■□□□□ 0.8
CLCN3P51790 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN3P51790 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CLCN3P51790 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.06■□□□□ 0.8
CLCN3P51790 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CLCN3P51790 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN3P51790 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN3P51790 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN3P51790 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN3P51790 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN3P51790 AC004870.1-201ENST00000315132 882 ntBASIC20.06■□□□□ 0.8
CLCN3P51790 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN3P51790 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN3P51790 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
CLCN3P51790 AC246785.2-201ENST00000432512 513 ntBASIC20.06■□□□□ 0.8
CLCN3P51790 EMBP1-201ENST00000458200 901 ntBASIC20.06■□□□□ 0.8
CLCN3P51790 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.06■□□□□ 0.8
CLCN3P51790 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN3P51790 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN3P51790 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.06■□□□□ 0.8
CLCN3P51790 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CLCN3P51790 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.06■□□□□ 0.8
CLCN3P51790 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CLCN3P51790 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN3P51790 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN3P51790 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLCN3P51790 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN3P51790 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.05■□□□□ 0.8
CLCN3P51790 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CLCN3P51790 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN3P51790 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN3P51790 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.05■□□□□ 0.8
CLCN3P51790 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.05■□□□□ 0.8
CLCN3P51790 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
CLCN3P51790 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CLCN3P51790 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN3P51790 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.05■□□□□ 0.8
CLCN3P51790 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.05■□□□□ 0.8
CLCN3P51790 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN3P51790 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.05■□□□□ 0.8
CLCN3P51790 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN3P51790 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN3P51790 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN3P51790 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN3P51790 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN3P51790 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLCN3P51790 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.05■□□□□ 0.8
CLCN3P51790 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.04■□□□□ 0.8
CLCN3P51790 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms