Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.42■□□□□ 0.86
BRCA2P51587 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.41■□□□□ 0.86
BRCA2P51587 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
BRCA2P51587 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BRCA2P51587 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.41■□□□□ 0.86
BRCA2P51587 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
BRCA2P51587 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BRCA2P51587 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.41■□□□□ 0.86
BRCA2P51587 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BRCA2P51587 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BRCA2P51587 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BRCA2P51587 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BRCA2P51587 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.41■□□□□ 0.86
BRCA2P51587 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.41■□□□□ 0.86
BRCA2P51587 AC005498.2-205ENST00000593218 784 ntBASIC20.41■□□□□ 0.86
BRCA2P51587 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BRCA2P51587 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
BRCA2P51587 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BRCA2P51587 AC012676.1-201ENST00000574705 1949 ntBASIC20.41■□□□□ 0.86
BRCA2P51587 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BRCA2P51587 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
BRCA2P51587 FP475955.4-201ENST00000623131 1990 ntBASIC20.41■□□□□ 0.86
BRCA2P51587 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BRCA2P51587 AC125634.1-201ENST00000438758 1403 ntBASIC20.41■□□□□ 0.86
BRCA2P51587 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
BRCA2P51587 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.41■□□□□ 0.86
BRCA2P51587 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.41■□□□□ 0.86
BRCA2P51587 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.41■□□□□ 0.86
BRCA2P51587 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
BRCA2P51587 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BRCA2P51587 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
BRCA2P51587 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.4■□□□□ 0.86
BRCA2P51587 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
BRCA2P51587 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.4■□□□□ 0.86
BRCA2P51587 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
BRCA2P51587 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
BRCA2P51587 PDPK2P-202ENST00000562415 1191 ntBASIC20.4■□□□□ 0.86
BRCA2P51587 AC093512.1-201ENST00000617969 520 ntBASIC20.4■□□□□ 0.86
BRCA2P51587 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
BRCA2P51587 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
BRCA2P51587 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
BRCA2P51587 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC20.4■□□□□ 0.86
BRCA2P51587 SNHG9-202ENST00000564014 471 ntBASIC20.4■□□□□ 0.86
BRCA2P51587 AC011467.2-201ENST00000598425 242 ntBASIC20.4■□□□□ 0.86
BRCA2P51587 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
BRCA2P51587 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.4■□□□□ 0.86
BRCA2P51587 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.4■□□□□ 0.86
BRCA2P51587 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.4■□□□□ 0.86
BRCA2P51587 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
BRCA2P51587 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
BRCA2P51587 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
BRCA2P51587 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
BRCA2P51587 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.4■□□□□ 0.86
BRCA2P51587 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.4■□□□□ 0.86
BRCA2P51587 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC20.4■□□□□ 0.86
BRCA2P51587 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.4■□□□□ 0.86
BRCA2P51587 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
BRCA2P51587 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.39■□□□□ 0.86
BRCA2P51587 IRX1P1-201ENST00000438849 1838 ntBASIC20.39■□□□□ 0.86
BRCA2P51587 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
BRCA2P51587 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
BRCA2P51587 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.39■□□□□ 0.85
BRCA2P51587 KRT8P50-201ENST00000562022 1438 ntBASIC20.39■□□□□ 0.85
BRCA2P51587 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
BRCA2P51587 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
BRCA2P51587 GSAP-205ENST00000430584 600 ntTSL 5 BASIC20.39■□□□□ 0.85
BRCA2P51587 AL513190.1-201ENST00000621254 727 ntBASIC20.39■□□□□ 0.85
BRCA2P51587 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.38■□□□□ 0.85
BRCA2P51587 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
BRCA2P51587 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.38■□□□□ 0.85
BRCA2P51587 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.38■□□□□ 0.85
BRCA2P51587 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BRCA2P51587 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BRCA2P51587 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
BRCA2P51587 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC20.38■□□□□ 0.85
BRCA2P51587 RNF34-208ENST00000555076 593 ntTSL 3 BASIC20.38■□□□□ 0.85
BRCA2P51587 AL078644.1-201ENST00000609881 752 ntBASIC20.38■□□□□ 0.85
BRCA2P51587 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
BRCA2P51587 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BRCA2P51587 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
BRCA2P51587 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.38■□□□□ 0.85
BRCA2P51587 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BRCA2P51587 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.38■□□□□ 0.85
BRCA2P51587 ABCD1P5-201ENST00000445663 754 ntBASIC20.38■□□□□ 0.85
BRCA2P51587 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.38■□□□□ 0.85
BRCA2P51587 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.38■□□□□ 0.85
BRCA2P51587 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.38■□□□□ 0.85
BRCA2P51587 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BRCA2P51587 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
BRCA2P51587 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BRCA2P51587 STOM-202ENST00000347359 870 ntTSL 2 BASIC20.37■□□□□ 0.85
BRCA2P51587 AC073621.1-201ENST00000392730 636 ntBASIC20.37■□□□□ 0.85
BRCA2P51587 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BRCA2P51587 AL035252.4-201ENST00000624174 288 ntBASIC20.37■□□□□ 0.85
BRCA2P51587 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.37■□□□□ 0.85
BRCA2P51587 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BRCA2P51587 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BRCA2P51587 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BRCA2P51587 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BRCA2P51587 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms