Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
TUBP50607 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TUBP50607 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TUBP50607 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TUBP50607 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.28■□□□□ 0.68
TUBP50607 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.28■□□□□ 0.68
TUBP50607 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TUBP50607 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBP50607 CROCCP3-202ENST00000420820 1947 ntBASIC19.27■□□□□ 0.68
TUBP50607 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.27■□□□□ 0.68
TUBP50607 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBP50607 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
TUBP50607 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.27■□□□□ 0.68
TUBP50607 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBP50607 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBP50607 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBP50607 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBP50607 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
TUBP50607 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBP50607 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.27■□□□□ 0.68
TUBP50607 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TUBP50607 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.27■□□□□ 0.68
TUBP50607 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.27■□□□□ 0.68
TUBP50607 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
TUBP50607 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBP50607 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.27■□□□□ 0.68
TUBP50607 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBP50607 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBP50607 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.27■□□□□ 0.68
TUBP50607 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TUBP50607 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
TUBP50607 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TUBP50607 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TUBP50607 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TUBP50607 NOC2LP1-202ENST00000452600 2235 ntBASIC19.27■□□□□ 0.67
TUBP50607 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBP50607 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBP50607 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBP50607 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBP50607 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.26■□□□□ 0.67
TUBP50607 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.26■□□□□ 0.67
TUBP50607 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TUBP50607 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TUBP50607 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBP50607 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.26■□□□□ 0.67
TUBP50607 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TUBP50607 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBP50607 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBP50607 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.26■□□□□ 0.67
TUBP50607 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.26■□□□□ 0.67
TUBP50607 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
TUBP50607 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.26■□□□□ 0.67
TUBP50607 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.26■□□□□ 0.67
TUBP50607 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.26■□□□□ 0.67
TUBP50607 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.26■□□□□ 0.67
TUBP50607 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TUBP50607 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBP50607 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBP50607 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.26■□□□□ 0.67
TUBP50607 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBP50607 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBP50607 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TUBP50607 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TUBP50607 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TUBP50607 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.25■□□□□ 0.67
TUBP50607 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TUBP50607 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.25■□□□□ 0.67
TUBP50607 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.25■□□□□ 0.67
TUBP50607 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TUBP50607 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TUBP50607 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TUBP50607 AP000997.3-201ENST00000623333 2250 ntBASIC19.25■□□□□ 0.67
TUBP50607 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
TUBP50607 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TUBP50607 AC020916.1-201ENST00000587762 1774 ntBASIC19.25■□□□□ 0.67
TUBP50607 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.25■□□□□ 0.67
TUBP50607 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TUBP50607 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TUBP50607 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TUBP50607 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TUBP50607 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TUBP50607 ATP5G2P1-201ENST00000433580 426 ntBASIC19.25■□□□□ 0.67
TUBP50607 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.25■□□□□ 0.67
TUBP50607 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.25■□□□□ 0.67
TUBP50607 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.25■□□□□ 0.67
TUBP50607 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.25■□□□□ 0.67
TUBP50607 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TUBP50607 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TUBP50607 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.25■□□□□ 0.67
TUBP50607 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TUBP50607 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.25■□□□□ 0.67
TUBP50607 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.25■□□□□ 0.67
TUBP50607 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TUBP50607 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TUBP50607 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TUBP50607 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TUBP50607 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TUBP50607 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TUBP50607 AC018470.1-201ENST00000624790 3129 ntBASIC19.24■□□□□ 0.67
TUBP50607 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms