Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRIM2P49643 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
PRIM2P49643 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
PRIM2P49643 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRIM2P49643 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PRIM2P49643 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PRIM2P49643 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRIM2P49643 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRIM2P49643 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRIM2P49643 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRIM2P49643 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.45■□□□□ 0.38
PRIM2P49643 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
PRIM2P49643 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
PRIM2P49643 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRIM2P49643 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.45■□□□□ 0.38
PRIM2P49643 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.45■□□□□ 0.38
PRIM2P49643 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.45■□□□□ 0.38
PRIM2P49643 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRIM2P49643 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRIM2P49643 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRIM2P49643 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRIM2P49643 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRIM2P49643 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRIM2P49643 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.45■□□□□ 0.38
PRIM2P49643 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PRIM2P49643 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRIM2P49643 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRIM2P49643 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
PRIM2P49643 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.45■□□□□ 0.38
PRIM2P49643 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRIM2P49643 AL109659.2-201ENST00000606809 1674 ntBASIC17.45■□□□□ 0.38
PRIM2P49643 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.45■□□□□ 0.38
PRIM2P49643 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.45■□□□□ 0.38
PRIM2P49643 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRIM2P49643 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRIM2P49643 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PRIM2P49643 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.44■□□□□ 0.38
PRIM2P49643 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRIM2P49643 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
PRIM2P49643 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRIM2P49643 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.44■□□□□ 0.38
PRIM2P49643 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRIM2P49643 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PRIM2P49643 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.44■□□□□ 0.38
PRIM2P49643 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRIM2P49643 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.44■□□□□ 0.38
PRIM2P49643 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRIM2P49643 AC068880.1-201ENST00000507289 2297 ntBASIC17.44■□□□□ 0.38
PRIM2P49643 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
PRIM2P49643 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRIM2P49643 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PRIM2P49643 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.44■□□□□ 0.38
PRIM2P49643 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.44■□□□□ 0.38
PRIM2P49643 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRIM2P49643 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PRIM2P49643 TSPY7P-201ENST00000431358 1114 ntBASIC17.44■□□□□ 0.38
PRIM2P49643 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRIM2P49643 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRIM2P49643 AC093827.2-201ENST00000512654 315 ntBASIC17.44■□□□□ 0.38
PRIM2P49643 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.44■□□□□ 0.38
PRIM2P49643 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.44■□□□□ 0.38
PRIM2P49643 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
PRIM2P49643 AC066615.1-201ENST00000640911 628 ntBASIC17.44■□□□□ 0.38
PRIM2P49643 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRIM2P49643 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.44■□□□□ 0.38
PRIM2P49643 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRIM2P49643 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRIM2P49643 PCDHB18P-201ENST00000524813 2368 ntBASIC17.44■□□□□ 0.38
PRIM2P49643 KRT17P2-201ENST00000300992 1314 ntBASIC17.44■□□□□ 0.38
PRIM2P49643 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRIM2P49643 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRIM2P49643 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRIM2P49643 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.44■□□□□ 0.38
PRIM2P49643 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRIM2P49643 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRIM2P49643 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
PRIM2P49643 AC135776.1-201ENST00000319817 2481 ntBASIC17.43■□□□□ 0.38
PRIM2P49643 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.43■□□□□ 0.38
PRIM2P49643 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRIM2P49643 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.43■□□□□ 0.38
PRIM2P49643 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.43■□□□□ 0.38
PRIM2P49643 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRIM2P49643 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRIM2P49643 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.43■□□□□ 0.38
PRIM2P49643 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRIM2P49643 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
PRIM2P49643 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRIM2P49643 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRIM2P49643 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRIM2P49643 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRIM2P49643 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRIM2P49643 MCCD1P1-208ENST00000445732 328 ntBASIC17.43■□□□□ 0.38
PRIM2P49643 RBM17P1-201ENST00000453646 1190 ntBASIC17.43■□□□□ 0.38
PRIM2P49643 SNORA78-201ENST00000459373 127 ntBASIC17.43■□□□□ 0.38
PRIM2P49643 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
PRIM2P49643 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.43■□□□□ 0.38
PRIM2P49643 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.43■□□□□ 0.38
PRIM2P49643 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.43■□□□□ 0.38
PRIM2P49643 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.43■□□□□ 0.38
PRIM2P49643 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms