Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 HOTTIP_1.1-201ENST00000620415 57 ntBASIC23.76■■□□□ 1.39
PRIM1P49642 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PRIM1P49642 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC23.76■■□□□ 1.39
PRIM1P49642 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PRIM1P49642 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PRIM1P49642 AC099343.3-201ENST00000605834 2503 ntBASIC23.76■■□□□ 1.39
PRIM1P49642 HEIH-201ENST00000623091 1652 ntBASIC23.76■■□□□ 1.39
PRIM1P49642 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
PRIM1P49642 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC23.75■■□□□ 1.39
PRIM1P49642 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PRIM1P49642 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC23.75■■□□□ 1.39
PRIM1P49642 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PRIM1P49642 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC23.75■■□□□ 1.39
PRIM1P49642 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PRIM1P49642 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PRIM1P49642 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC23.75■■□□□ 1.39
PRIM1P49642 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC23.75■■□□□ 1.39
PRIM1P49642 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC23.75■■□□□ 1.39
PRIM1P49642 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC23.75■■□□□ 1.39
PRIM1P49642 AC113404.2-201ENST00000507884 177 ntBASIC23.75■■□□□ 1.39
PRIM1P49642 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC23.75■■□□□ 1.39
PRIM1P49642 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC23.75■■□□□ 1.39
PRIM1P49642 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC23.75■■□□□ 1.39
PRIM1P49642 AL356488.2-201ENST00000602755 427 ntBASIC23.75■■□□□ 1.39
PRIM1P49642 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PRIM1P49642 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PRIM1P49642 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
PRIM1P49642 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PRIM1P49642 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PRIM1P49642 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
PRIM1P49642 INTS4P1-201ENST00000438455 1935 ntBASIC23.74■■□□□ 1.39
PRIM1P49642 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC23.74■■□□□ 1.39
PRIM1P49642 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PRIM1P49642 MTMR9LP-203ENST00000426597 1545 ntBASIC23.74■■□□□ 1.39
PRIM1P49642 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PRIM1P49642 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
PRIM1P49642 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
PRIM1P49642 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC23.74■■□□□ 1.39
PRIM1P49642 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC23.74■■□□□ 1.39
PRIM1P49642 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC23.74■■□□□ 1.39
PRIM1P49642 KRT18P41-201ENST00000518924 1277 ntBASIC23.74■■□□□ 1.39
PRIM1P49642 AC140113.2-201ENST00000604370 208 ntBASIC23.74■■□□□ 1.39
PRIM1P49642 AC027601.4-201ENST00000611259 610 ntBASIC23.74■■□□□ 1.39
PRIM1P49642 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC23.74■■□□□ 1.39
PRIM1P49642 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PRIM1P49642 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PRIM1P49642 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC23.74■■□□□ 1.39
PRIM1P49642 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
PRIM1P49642 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PRIM1P49642 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
PRIM1P49642 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
PRIM1P49642 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
PRIM1P49642 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PRIM1P49642 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC23.74■■□□□ 1.39
PRIM1P49642 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC23.73■■□□□ 1.39
PRIM1P49642 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PRIM1P49642 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PRIM1P49642 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC23.73■■□□□ 1.39
PRIM1P49642 GGCT-205ENST00000409436 954 ntTSL 3 BASIC23.73■■□□□ 1.39
PRIM1P49642 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC23.73■■□□□ 1.39
PRIM1P49642 RPS2P1-201ENST00000434010 821 ntBASIC23.73■■□□□ 1.39
PRIM1P49642 MEG3-211ENST00000452514 461 ntTSL 3 BASIC23.73■■□□□ 1.39
PRIM1P49642 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PRIM1P49642 SART3-203ENST00000546611 1184 ntBASIC23.73■■□□□ 1.39
PRIM1P49642 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC23.73■■□□□ 1.39
PRIM1P49642 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC23.73■■□□□ 1.39
PRIM1P49642 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC23.73■■□□□ 1.39
PRIM1P49642 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
PRIM1P49642 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC23.73■■□□□ 1.39
PRIM1P49642 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC23.73■■□□□ 1.39
PRIM1P49642 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PRIM1P49642 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC23.73■■□□□ 1.39
PRIM1P49642 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC23.73■■□□□ 1.39
PRIM1P49642 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
PRIM1P49642 NARF-204ENST00000390006 1766 ntTSL 2 BASIC23.73■■□□□ 1.39
PRIM1P49642 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC23.73■■□□□ 1.39
PRIM1P49642 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
PRIM1P49642 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC23.72■■□□□ 1.39
PRIM1P49642 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
PRIM1P49642 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
PRIM1P49642 AC012640.2-201ENST00000561606 901 ntBASIC23.72■■□□□ 1.39
PRIM1P49642 AC034105.1-201ENST00000563488 319 ntBASIC23.72■■□□□ 1.39
PRIM1P49642 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PRIM1P49642 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PRIM1P49642 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PRIM1P49642 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC23.72■■□□□ 1.39
PRIM1P49642 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC23.72■■□□□ 1.39
PRIM1P49642 AP005117.1-201ENST00000584346 1413 ntBASIC23.72■■□□□ 1.39
PRIM1P49642 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC23.72■■□□□ 1.39
PRIM1P49642 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC23.72■■□□□ 1.39
PRIM1P49642 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
PRIM1P49642 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
PRIM1P49642 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC23.72■■□□□ 1.39
PRIM1P49642 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PRIM1P49642 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PRIM1P49642 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PRIM1P49642 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PRIM1P49642 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PRIM1P49642 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PRIM1P49642 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms