Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TNFSF9P41273 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFSF9P41273 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TNFSF9P41273 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.78■□□□□ 0.76
TNFSF9P41273 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFSF9P41273 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFSF9P41273 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFSF9P41273 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFSF9P41273 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.78■□□□□ 0.76
TNFSF9P41273 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.78■□□□□ 0.76
TNFSF9P41273 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.78■□□□□ 0.76
TNFSF9P41273 AP002383.4-201ENST00000442518 975 ntBASIC19.78■□□□□ 0.76
TNFSF9P41273 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.78■□□□□ 0.76
TNFSF9P41273 TSSC2-201ENST00000450217 709 ntBASIC19.78■□□□□ 0.76
TNFSF9P41273 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.78■□□□□ 0.76
TNFSF9P41273 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.78■□□□□ 0.76
TNFSF9P41273 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.78■□□□□ 0.76
TNFSF9P41273 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.78■□□□□ 0.76
TNFSF9P41273 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.78■□□□□ 0.76
TNFSF9P41273 NPAP1P7-201ENST00000613027 823 ntBASIC19.78■□□□□ 0.76
TNFSF9P41273 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.78■□□□□ 0.76
TNFSF9P41273 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
TNFSF9P41273 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.78■□□□□ 0.76
TNFSF9P41273 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.78■□□□□ 0.76
TNFSF9P41273 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFSF9P41273 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TNFSF9P41273 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFSF9P41273 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFSF9P41273 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TNFSF9P41273 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFSF9P41273 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.78■□□□□ 0.76
TNFSF9P41273 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFSF9P41273 AC090164.3-201ENST00000610780 2143 ntBASIC19.78■□□□□ 0.76
TNFSF9P41273 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFSF9P41273 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TNFSF9P41273 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFSF9P41273 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TNFSF9P41273 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
TNFSF9P41273 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TNFSF9P41273 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
TNFSF9P41273 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TNFSF9P41273 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TNFSF9P41273 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TNFSF9P41273 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TNFSF9P41273 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.77■□□□□ 0.76
TNFSF9P41273 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.77■□□□□ 0.76
TNFSF9P41273 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TNFSF9P41273 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.77■□□□□ 0.76
TNFSF9P41273 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TNFSF9P41273 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.77■□□□□ 0.76
TNFSF9P41273 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
TNFSF9P41273 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
TNFSF9P41273 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.77■□□□□ 0.76
TNFSF9P41273 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.77■□□□□ 0.76
TNFSF9P41273 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.77■□□□□ 0.76
TNFSF9P41273 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
TNFSF9P41273 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.77■□□□□ 0.76
TNFSF9P41273 AL353692.3-201ENST00000407031 1396 ntBASIC19.77■□□□□ 0.76
TNFSF9P41273 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TNFSF9P41273 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TNFSF9P41273 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TNFSF9P41273 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF9P41273 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.76■□□□□ 0.75
TNFSF9P41273 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF9P41273 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
TNFSF9P41273 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.76■□□□□ 0.75
TNFSF9P41273 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF9P41273 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF9P41273 PHGDH-209ENST00000641074 1780 ntBASIC19.76■□□□□ 0.75
TNFSF9P41273 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF9P41273 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.76■□□□□ 0.75
TNFSF9P41273 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.76■□□□□ 0.75
TNFSF9P41273 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.76■□□□□ 0.75
TNFSF9P41273 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.76■□□□□ 0.75
TNFSF9P41273 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TNFSF9P41273 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.76■□□□□ 0.75
TNFSF9P41273 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
TNFSF9P41273 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF9P41273 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF9P41273 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TNFSF9P41273 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF9P41273 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
TNFSF9P41273 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF9P41273 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF9P41273 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF9P41273 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF9P41273 AC135776.1-201ENST00000319817 2481 ntBASIC19.76■□□□□ 0.75
TNFSF9P41273 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF9P41273 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF9P41273 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFSF9P41273 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TNFSF9P41273 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TNFSF9P41273 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
TNFSF9P41273 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFSF9P41273 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFSF9P41273 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
TNFSF9P41273 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFSF9P41273 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFSF9P41273 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.75■□□□□ 0.75
TNFSF9P41273 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms