Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.95■□□□□ 0.46
CDH3P22223 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH3P22223 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDH3P22223 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CDH3P22223 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH3P22223 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDH3P22223 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDH3P22223 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH3P22223 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH3P22223 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH3P22223 MIR564-202ENST00000385049 94 ntBASIC17.94■□□□□ 0.46
CDH3P22223 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH3P22223 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH3P22223 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CDH3P22223 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH3P22223 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH3P22223 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH3P22223 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH3P22223 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH3P22223 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.94■□□□□ 0.46
CDH3P22223 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH3P22223 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH3P22223 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH3P22223 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDH3P22223 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH3P22223 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.94■□□□□ 0.46
CDH3P22223 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.94■□□□□ 0.46
CDH3P22223 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.94■□□□□ 0.46
CDH3P22223 AC068587.9-201ENST00000641814 219 ntBASIC17.94■□□□□ 0.46
CDH3P22223 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH3P22223 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDH3P22223 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CDH3P22223 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH3P22223 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH3P22223 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH3P22223 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.94■□□□□ 0.46
CDH3P22223 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH3P22223 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.94■□□□□ 0.46
CDH3P22223 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.94■□□□□ 0.46
CDH3P22223 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.94■□□□□ 0.46
CDH3P22223 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH3P22223 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH3P22223 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.94■□□□□ 0.46
CDH3P22223 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDH3P22223 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH3P22223 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH3P22223 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CDH3P22223 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH3P22223 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH3P22223 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.93■□□□□ 0.46
CDH3P22223 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH3P22223 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CDH3P22223 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH3P22223 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH3P22223 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH3P22223 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.93■□□□□ 0.46
CDH3P22223 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CDH3P22223 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
CDH3P22223 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH3P22223 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.93■□□□□ 0.46
CDH3P22223 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH3P22223 SPDYE15P-201ENST00000424157 909 ntBASIC17.93■□□□□ 0.46
CDH3P22223 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH3P22223 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH3P22223 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH3P22223 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH3P22223 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
CDH3P22223 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH3P22223 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH3P22223 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.93■□□□□ 0.46
CDH3P22223 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH3P22223 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.93■□□□□ 0.46
CDH3P22223 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CDH3P22223 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH3P22223 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH3P22223 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH3P22223 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CDH3P22223 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH3P22223 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH3P22223 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH3P22223 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH3P22223 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH3P22223 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH3P22223 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CDH3P22223 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CDH3P22223 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
CDH3P22223 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH3P22223 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CDH3P22223 KRT8P7-201ENST00000533003 1432 ntBASIC17.92■□□□□ 0.46
CDH3P22223 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.92■□□□□ 0.46
CDH3P22223 AC034236.2-201ENST00000606662 1610 ntBASIC17.92■□□□□ 0.46
CDH3P22223 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH3P22223 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH3P22223 RASA4DP-201ENST00000460726 1199 ntBASIC17.92■□□□□ 0.46
CDH3P22223 SEC1P-202ENST00000473944 940 ntBASIC17.92■□□□□ 0.46
CDH3P22223 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.92■□□□□ 0.46
CDH3P22223 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH3P22223 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH3P22223 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CDH3P22223 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms