Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NFKB1P19838 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.65■□□□□ 0.58
NFKB1P19838 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NFKB1P19838 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NFKB1P19838 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
NFKB1P19838 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NFKB1P19838 PHGDH-209ENST00000641074 1780 ntBASIC18.65■□□□□ 0.58
NFKB1P19838 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
NFKB1P19838 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
NFKB1P19838 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NFKB1P19838 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
NFKB1P19838 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
NFKB1P19838 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.65■□□□□ 0.58
NFKB1P19838 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.65■□□□□ 0.58
NFKB1P19838 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NFKB1P19838 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.64■□□□□ 0.58
NFKB1P19838 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NFKB1P19838 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.64■□□□□ 0.58
NFKB1P19838 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.64■□□□□ 0.57
NFKB1P19838 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NFKB1P19838 REXO1L9P-201ENST00000604264 2108 ntBASIC18.64■□□□□ 0.57
NFKB1P19838 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NFKB1P19838 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NFKB1P19838 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NFKB1P19838 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NFKB1P19838 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NFKB1P19838 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.64■□□□□ 0.57
NFKB1P19838 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NFKB1P19838 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
NFKB1P19838 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.64■□□□□ 0.57
NFKB1P19838 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.64■□□□□ 0.57
NFKB1P19838 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.64■□□□□ 0.57
NFKB1P19838 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
NFKB1P19838 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NFKB1P19838 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NFKB1P19838 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NFKB1P19838 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NFKB1P19838 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
NFKB1P19838 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NFKB1P19838 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NFKB1P19838 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
NFKB1P19838 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.63■□□□□ 0.57
NFKB1P19838 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NFKB1P19838 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NFKB1P19838 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.63■□□□□ 0.57
NFKB1P19838 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NFKB1P19838 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
NFKB1P19838 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NFKB1P19838 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NFKB1P19838 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.63■□□□□ 0.57
NFKB1P19838 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NFKB1P19838 AP000523.1-201ENST00000398242 1049 ntBASIC18.63■□□□□ 0.57
NFKB1P19838 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.63■□□□□ 0.57
NFKB1P19838 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
NFKB1P19838 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
NFKB1P19838 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.63■□□□□ 0.57
NFKB1P19838 AL023973.1-201ENST00000624619 620 ntBASIC18.63■□□□□ 0.57
NFKB1P19838 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NFKB1P19838 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NFKB1P19838 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NFKB1P19838 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.63■□□□□ 0.57
NFKB1P19838 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
NFKB1P19838 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NFKB1P19838 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
NFKB1P19838 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NFKB1P19838 LINC01126-201ENST00000623515 1646 ntBASIC18.63■□□□□ 0.57
NFKB1P19838 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
NFKB1P19838 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.62■□□□□ 0.57
NFKB1P19838 AL096828.2-201ENST00000567259 1965 ntBASIC18.62■□□□□ 0.57
NFKB1P19838 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.62■□□□□ 0.57
NFKB1P19838 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NFKB1P19838 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NFKB1P19838 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
NFKB1P19838 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
NFKB1P19838 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
NFKB1P19838 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NFKB1P19838 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
NFKB1P19838 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NFKB1P19838 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.62■□□□□ 0.57
NFKB1P19838 AC113347.1-201ENST00000413321 391 ntBASIC18.62■□□□□ 0.57
NFKB1P19838 LIN28AP1-201ENST00000429574 405 ntBASIC18.62■□□□□ 0.57
NFKB1P19838 ATP5G1P1-201ENST00000448724 379 ntBASIC18.62■□□□□ 0.57
NFKB1P19838 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.62■□□□□ 0.57
NFKB1P19838 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.62■□□□□ 0.57
NFKB1P19838 MIR3917-201ENST00000580971 93 ntBASIC18.62■□□□□ 0.57
NFKB1P19838 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
NFKB1P19838 AC005363.2-201ENST00000618631 242 ntBASIC18.62■□□□□ 0.57
NFKB1P19838 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NFKB1P19838 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NFKB1P19838 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NFKB1P19838 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
NFKB1P19838 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
NFKB1P19838 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
NFKB1P19838 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NFKB1P19838 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.62■□□□□ 0.57
NFKB1P19838 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
NFKB1P19838 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.62■□□□□ 0.57
NFKB1P19838 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NFKB1P19838 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.62■□□□□ 0.57
NFKB1P19838 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms