Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
DEFA4P12838 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
DEFA4P12838 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DEFA4P12838 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
DEFA4P12838 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DEFA4P12838 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DEFA4P12838 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DEFA4P12838 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC14.92□□□□□ -0.02
DEFA4P12838 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DEFA4P12838 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DEFA4P12838 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DEFA4P12838 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
DEFA4P12838 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DEFA4P12838 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DEFA4P12838 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
DEFA4P12838 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
DEFA4P12838 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
DEFA4P12838 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC14.92□□□□□ -0.02
DEFA4P12838 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
DEFA4P12838 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC14.92□□□□□ -0.02
DEFA4P12838 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC14.92□□□□□ -0.02
DEFA4P12838 AC142381.4-202ENST00000563973 229 ntBASIC14.92□□□□□ -0.02
DEFA4P12838 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC14.92□□□□□ -0.02
DEFA4P12838 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC14.92□□□□□ -0.02
DEFA4P12838 AC011298.2-201ENST00000617989 482 ntBASIC14.92□□□□□ -0.02
DEFA4P12838 AC083906.6-201ENST00000641366 219 ntBASIC14.92□□□□□ -0.02
DEFA4P12838 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
DEFA4P12838 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
DEFA4P12838 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DEFA4P12838 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DEFA4P12838 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DEFA4P12838 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
DEFA4P12838 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.92□□□□□ -0.02
DEFA4P12838 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DEFA4P12838 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC14.92□□□□□ -0.02
DEFA4P12838 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
DEFA4P12838 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DEFA4P12838 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
DEFA4P12838 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
DEFA4P12838 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
DEFA4P12838 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
DEFA4P12838 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
DEFA4P12838 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.91□□□□□ -0.02
DEFA4P12838 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
DEFA4P12838 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC14.91□□□□□ -0.02
DEFA4P12838 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC14.91□□□□□ -0.02
DEFA4P12838 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
DEFA4P12838 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
DEFA4P12838 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
DEFA4P12838 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
DEFA4P12838 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
DEFA4P12838 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC14.91□□□□□ -0.02
DEFA4P12838 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
DEFA4P12838 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC14.91□□□□□ -0.02
DEFA4P12838 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC14.91□□□□□ -0.02
DEFA4P12838 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
DEFA4P12838 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
DEFA4P12838 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
DEFA4P12838 AL158047.1-201ENST00000445918 881 ntBASIC14.91□□□□□ -0.02
DEFA4P12838 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
DEFA4P12838 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.91□□□□□ -0.02
DEFA4P12838 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC14.91□□□□□ -0.02
DEFA4P12838 AC026271.3-201ENST00000571884 352 ntBASIC14.91□□□□□ -0.02
DEFA4P12838 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.91□□□□□ -0.02
DEFA4P12838 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC14.91□□□□□ -0.02
DEFA4P12838 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC14.91□□□□□ -0.02
DEFA4P12838 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
DEFA4P12838 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
DEFA4P12838 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.91□□□□□ -0.02
DEFA4P12838 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
DEFA4P12838 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
DEFA4P12838 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
DEFA4P12838 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
DEFA4P12838 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
DEFA4P12838 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
DEFA4P12838 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC14.91□□□□□ -0.02
DEFA4P12838 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
DEFA4P12838 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
DEFA4P12838 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
DEFA4P12838 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.91□□□□□ -0.02
DEFA4P12838 KRT8P11-201ENST00000409686 1436 ntBASIC14.91□□□□□ -0.02
DEFA4P12838 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DEFA4P12838 RCC2P6-201ENST00000526625 1557 ntBASIC14.9□□□□□ -0.02
DEFA4P12838 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DEFA4P12838 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DEFA4P12838 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.9□□□□□ -0.02
DEFA4P12838 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
DEFA4P12838 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
DEFA4P12838 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
DEFA4P12838 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DEFA4P12838 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
DEFA4P12838 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
DEFA4P12838 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.9□□□□□ -0.02
DEFA4P12838 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
DEFA4P12838 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
DEFA4P12838 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
DEFA4P12838 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC14.9□□□□□ -0.02
DEFA4P12838 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC14.9□□□□□ -0.02
DEFA4P12838 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
DEFA4P12838 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms