Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD28P10747 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD28P10747 LINC00167-201ENST00000530583 1419 ntBASIC14.32□□□□□ -0.12
CD28P10747 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC14.32□□□□□ -0.12
CD28P10747 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD28P10747 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD28P10747 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD28P10747 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CD28P10747 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD28P10747 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD28P10747 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD28P10747 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC14.32□□□□□ -0.12
CD28P10747 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC14.32□□□□□ -0.12
CD28P10747 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC14.32□□□□□ -0.12
CD28P10747 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD28P10747 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD28P10747 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD28P10747 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD28P10747 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.32□□□□□ -0.12
CD28P10747 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.32□□□□□ -0.12
CD28P10747 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD28P10747 AC104819.1-201ENST00000504587 486 ntBASIC14.32□□□□□ -0.12
CD28P10747 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC14.32□□□□□ -0.12
CD28P10747 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.32□□□□□ -0.12
CD28P10747 AC091304.2-201ENST00000564639 760 ntBASIC14.32□□□□□ -0.12
CD28P10747 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.32□□□□□ -0.12
CD28P10747 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.32□□□□□ -0.12
CD28P10747 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.32□□□□□ -0.12
CD28P10747 AL121772.3-201ENST00000610840 674 ntBASIC14.32□□□□□ -0.12
CD28P10747 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CD28P10747 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.32□□□□□ -0.12
CD28P10747 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD28P10747 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC14.32□□□□□ -0.12
CD28P10747 NFYC-AS1-201ENST00000606277 1687 ntBASIC14.32□□□□□ -0.12
CD28P10747 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC14.32□□□□□ -0.12
CD28P10747 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD28P10747 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD28P10747 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD28P10747 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CD28P10747 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD28P10747 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD28P10747 KRT8P50-201ENST00000562022 1438 ntBASIC14.32□□□□□ -0.12
CD28P10747 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CD28P10747 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
CD28P10747 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD28P10747 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CD28P10747 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CD28P10747 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC14.31□□□□□ -0.12
CD28P10747 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD28P10747 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.31□□□□□ -0.12
CD28P10747 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
CD28P10747 TSPY19P-201ENST00000418461 509 ntBASIC14.31□□□□□ -0.12
CD28P10747 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.31□□□□□ -0.12
CD28P10747 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CD28P10747 TSPY18P-201ENST00000441642 509 ntBASIC14.31□□□□□ -0.12
CD28P10747 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.31□□□□□ -0.12
CD28P10747 EMBP1-201ENST00000458200 901 ntBASIC14.31□□□□□ -0.12
CD28P10747 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.31□□□□□ -0.12
CD28P10747 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD28P10747 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.31□□□□□ -0.12
CD28P10747 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.31□□□□□ -0.12
CD28P10747 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CD28P10747 AC138894.3-201ENST00000603787 634 ntBASIC14.31□□□□□ -0.12
CD28P10747 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.31□□□□□ -0.12
CD28P10747 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC14.31□□□□□ -0.12
CD28P10747 AC124864.1-201ENST00000623408 392 ntBASIC14.31□□□□□ -0.12
CD28P10747 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD28P10747 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD28P10747 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD28P10747 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD28P10747 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD28P10747 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD28P10747 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD28P10747 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD28P10747 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC14.31□□□□□ -0.12
CD28P10747 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD28P10747 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC14.31□□□□□ -0.12
CD28P10747 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.31□□□□□ -0.12
CD28P10747 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD28P10747 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD28P10747 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD28P10747 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD28P10747 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD28P10747 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC14.31□□□□□ -0.12
CD28P10747 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD28P10747 MTMR9LP-203ENST00000426597 1545 ntBASIC14.31□□□□□ -0.12
CD28P10747 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CD28P10747 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
CD28P10747 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CD28P10747 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC14.3□□□□□ -0.12
CD28P10747 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD28P10747 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
CD28P10747 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC14.3□□□□□ -0.12
CD28P10747 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CD28P10747 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD28P10747 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CD28P10747 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD28P10747 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD28P10747 GUSBP12-201ENST00000513727 720 ntBASIC14.3□□□□□ -0.12
CD28P10747 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms