Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHGAP10645 PAN3-AS1-201ENST00000563843 1351 ntBASIC26.31■■□□□ 1.8
CHGAP10645 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
CHGAP10645 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC26.31■■□□□ 1.8
CHGAP10645 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHGAP10645 ASL-204ENST00000395331 1538 ntTSL 5 BASIC26.3■■□□□ 1.8
CHGAP10645 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHGAP10645 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC26.3■■□□□ 1.8
CHGAP10645 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHGAP10645 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHGAP10645 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
CHGAP10645 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
CHGAP10645 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
CHGAP10645 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHGAP10645 PMS2P7-201ENST00000506558 1336 ntBASIC26.3■■□□□ 1.8
CHGAP10645 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHGAP10645 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CHGAP10645 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CHGAP10645 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHGAP10645 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC26.3■■□□□ 1.8
CHGAP10645 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHGAP10645 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CHGAP10645 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CHGAP10645 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CHGAP10645 CCS-201ENST00000310190 942 ntTSL 5 BASIC26.29■■□□□ 1.8
CHGAP10645 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CHGAP10645 MIR1233-2-201ENST00000408138 82 ntBASIC26.29■■□□□ 1.8
CHGAP10645 MIR1233-1-201ENST00000408722 82 ntBASIC26.29■■□□□ 1.8
CHGAP10645 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
CHGAP10645 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CHGAP10645 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CHGAP10645 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CHGAP10645 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
CHGAP10645 SDHAP2-201ENST00000455183 2001 ntBASIC26.29■■□□□ 1.8
CHGAP10645 ADK-206ENST00000541550 2222 ntTSL 2 BASIC26.29■■□□□ 1.8
CHGAP10645 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
CHGAP10645 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CHGAP10645 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CHGAP10645 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHGAP10645 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CHGAP10645 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHGAP10645 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CHGAP10645 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CHGAP10645 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC26.28■■□□□ 1.8
CHGAP10645 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
CHGAP10645 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHGAP10645 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHGAP10645 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CHGAP10645 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC26.28■■□□□ 1.8
CHGAP10645 PIN1-206ENST00000587625 878 ntTSL 2 BASIC26.28■■□□□ 1.8
CHGAP10645 GZMM-202ENST00000592501 941 ntTSL 3 BASIC26.28■■□□□ 1.8
CHGAP10645 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC26.28■■□□□ 1.8
CHGAP10645 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHGAP10645 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHGAP10645 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC26.28■■□□□ 1.8
CHGAP10645 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CHGAP10645 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHGAP10645 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC26.28■■□□□ 1.8
CHGAP10645 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHGAP10645 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHGAP10645 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
CHGAP10645 AL024508.2-201ENST00000607749 1894 ntBASIC26.28■■□□□ 1.8
CHGAP10645 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
CHGAP10645 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHGAP10645 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CHGAP10645 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CHGAP10645 MTCL1P1-201ENST00000446207 792 ntBASIC26.27■■□□□ 1.8
CHGAP10645 MEG3-211ENST00000452514 461 ntTSL 3 BASIC26.27■■□□□ 1.8
CHGAP10645 SCARNA2-201ENST00000458748 420 ntBASIC26.27■■□□□ 1.8
CHGAP10645 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHGAP10645 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHGAP10645 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
CHGAP10645 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC26.27■■□□□ 1.8
CHGAP10645 SNAI3-AS1-205ENST00000568633 2096 ntBASIC26.27■■□□□ 1.8
CHGAP10645 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHGAP10645 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHGAP10645 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHGAP10645 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHGAP10645 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHGAP10645 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHGAP10645 LINC00602-201ENST00000629776 2065 ntBASIC26.26■■□□□ 1.79
CHGAP10645 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CHGAP10645 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
CHGAP10645 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CHGAP10645 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CHGAP10645 ZNF259P1-201ENST00000407656 1365 ntBASIC26.26■■□□□ 1.79
CHGAP10645 FUOM-202ENST00000368551 628 ntTSL 3 BASIC26.26■■□□□ 1.79
CHGAP10645 RBM17P3-201ENST00000417687 1192 ntBASIC26.26■■□□□ 1.79
CHGAP10645 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
CHGAP10645 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC26.26■■□□□ 1.79
CHGAP10645 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC26.26■■□□□ 1.79
CHGAP10645 PAM16-208ENST00000573553 722 ntTSL 2 BASIC26.26■■□□□ 1.79
CHGAP10645 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC26.26■■□□□ 1.79
CHGAP10645 AC008687.5-201ENST00000593746 558 ntBASIC26.26■■□□□ 1.79
CHGAP10645 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC26.26■■□□□ 1.79
CHGAP10645 AC083906.6-201ENST00000641366 219 ntBASIC26.26■■□□□ 1.79
CHGAP10645 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
CHGAP10645 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHGAP10645 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHGAP10645 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms