Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RARAP10276 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RARAP10276 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RARAP10276 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RARAP10276 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RARAP10276 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RARAP10276 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.23■□□□□ 0.67
RARAP10276 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RARAP10276 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RARAP10276 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.23■□□□□ 0.67
RARAP10276 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
RARAP10276 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.23■□□□□ 0.67
RARAP10276 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.23■□□□□ 0.67
RARAP10276 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RARAP10276 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RARAP10276 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RARAP10276 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
RARAP10276 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RARAP10276 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
RARAP10276 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RARAP10276 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RARAP10276 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RARAP10276 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RARAP10276 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RARAP10276 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RARAP10276 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RARAP10276 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RARAP10276 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RARAP10276 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.22■□□□□ 0.67
RARAP10276 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.22■□□□□ 0.67
RARAP10276 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.22■□□□□ 0.67
RARAP10276 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RARAP10276 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RARAP10276 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
RARAP10276 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RARAP10276 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RARAP10276 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.22■□□□□ 0.67
RARAP10276 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.22■□□□□ 0.67
RARAP10276 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RARAP10276 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RARAP10276 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RARAP10276 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RARAP10276 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RARAP10276 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RARAP10276 KRT18P23-201ENST00000435622 1283 ntBASIC19.22■□□□□ 0.67
RARAP10276 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RARAP10276 AC128688.1-201ENST00000487626 519 ntBASIC19.22■□□□□ 0.67
RARAP10276 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RARAP10276 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.22■□□□□ 0.67
RARAP10276 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.22■□□□□ 0.67
RARAP10276 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.22■□□□□ 0.67
RARAP10276 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RARAP10276 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RARAP10276 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RARAP10276 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RARAP10276 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RARAP10276 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RARAP10276 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RARAP10276 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RARAP10276 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RARAP10276 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.22■□□□□ 0.67
RARAP10276 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RARAP10276 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RARAP10276 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RARAP10276 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RARAP10276 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RARAP10276 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.21■□□□□ 0.67
RARAP10276 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RARAP10276 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RARAP10276 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RARAP10276 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.21■□□□□ 0.67
RARAP10276 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RARAP10276 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
RARAP10276 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RARAP10276 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RARAP10276 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.21■□□□□ 0.67
RARAP10276 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RARAP10276 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RARAP10276 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.21■□□□□ 0.67
RARAP10276 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RARAP10276 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.21■□□□□ 0.67
RARAP10276 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RARAP10276 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RARAP10276 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RARAP10276 ECEL1P2-202ENST00000465689 757 ntBASIC19.21■□□□□ 0.67
RARAP10276 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.21■□□□□ 0.67
RARAP10276 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.21■□□□□ 0.67
RARAP10276 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RARAP10276 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.21■□□□□ 0.67
RARAP10276 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
RARAP10276 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RARAP10276 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RARAP10276 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RARAP10276 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.21■□□□□ 0.67
RARAP10276 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RARAP10276 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RARAP10276 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RARAP10276 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RARAP10276 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RARAP10276 AC139713.2-201ENST00000641328 2723 ntBASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms