Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CLTAP09496 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLTAP09496 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLTAP09496 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.02■□□□□ 0.8
CLTAP09496 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.02■□□□□ 0.8
CLTAP09496 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.02■□□□□ 0.8
CLTAP09496 AP000550.4-202ENST00000639755 178 ntBASIC20.02■□□□□ 0.8
CLTAP09496 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLTAP09496 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.02■□□□□ 0.8
CLTAP09496 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.02■□□□□ 0.8
CLTAP09496 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLTAP09496 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLTAP09496 FZD10-202ENST00000539839 3282 ntBASIC20.02■□□□□ 0.8
CLTAP09496 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLTAP09496 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
CLTAP09496 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
CLTAP09496 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.02■□□□□ 0.79
CLTAP09496 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
CLTAP09496 AC005332.1-201ENST00000577698 1310 ntBASIC20.02■□□□□ 0.79
CLTAP09496 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLTAP09496 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.01■□□□□ 0.79
CLTAP09496 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLTAP09496 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLTAP09496 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLTAP09496 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.01■□□□□ 0.79
CLTAP09496 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLTAP09496 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.01■□□□□ 0.79
CLTAP09496 MIR149-201ENST00000384879 89 ntBASIC20.01■□□□□ 0.79
CLTAP09496 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLTAP09496 PCED1CP-201ENST00000419887 785 ntBASIC20.01■□□□□ 0.79
CLTAP09496 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLTAP09496 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.01■□□□□ 0.79
CLTAP09496 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLTAP09496 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CLTAP09496 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLTAP09496 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLTAP09496 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLTAP09496 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLTAP09496 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLTAP09496 WIZP1-201ENST00000531444 2299 ntBASIC20.01■□□□□ 0.79
CLTAP09496 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.01■□□□□ 0.79
CLTAP09496 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLTAP09496 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20■□□□□ 0.79
CLTAP09496 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLTAP09496 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLTAP09496 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CLTAP09496 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
CLTAP09496 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLTAP09496 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CLTAP09496 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLTAP09496 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLTAP09496 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CLTAP09496 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20■□□□□ 0.79
CLTAP09496 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20■□□□□ 0.79
CLTAP09496 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20■□□□□ 0.79
CLTAP09496 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLTAP09496 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20■□□□□ 0.79
CLTAP09496 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
CLTAP09496 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20■□□□□ 0.79
CLTAP09496 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLTAP09496 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
CLTAP09496 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20■□□□□ 0.79
CLTAP09496 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20■□□□□ 0.79
CLTAP09496 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLTAP09496 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLTAP09496 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CLTAP09496 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.99■□□□□ 0.79
CLTAP09496 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.99■□□□□ 0.79
CLTAP09496 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.99■□□□□ 0.79
CLTAP09496 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.99■□□□□ 0.79
CLTAP09496 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.99■□□□□ 0.79
CLTAP09496 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.99■□□□□ 0.79
CLTAP09496 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLTAP09496 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLTAP09496 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.99■□□□□ 0.79
CLTAP09496 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLTAP09496 MIR662-201ENST00000384847 95 ntBASIC19.99■□□□□ 0.79
CLTAP09496 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
CLTAP09496 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.99■□□□□ 0.79
CLTAP09496 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.99■□□□□ 0.79
CLTAP09496 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.99■□□□□ 0.79
CLTAP09496 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.99■□□□□ 0.79
CLTAP09496 AC116407.4-201ENST00000623319 1061 ntBASIC19.99■□□□□ 0.79
CLTAP09496 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLTAP09496 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.99■□□□□ 0.79
CLTAP09496 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CLTAP09496 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLTAP09496 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CLTAP09496 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLTAP09496 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLTAP09496 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLTAP09496 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLTAP09496 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CLTAP09496 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLTAP09496 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLTAP09496 AC009102.3-201ENST00000623118 1491 ntBASIC19.99■□□□□ 0.79
CLTAP09496 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLTAP09496 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLTAP09496 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLTAP09496 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms