Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MMP3P08254 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MMP3P08254 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
MMP3P08254 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MMP3P08254 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MMP3P08254 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MMP3P08254 AL031284.1-201ENST00000419297 478 ntBASIC20.23■□□□□ 0.83
MMP3P08254 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
MMP3P08254 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MMP3P08254 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.23■□□□□ 0.83
MMP3P08254 AC009533.2-201ENST00000543664 586 ntBASIC20.23■□□□□ 0.83
MMP3P08254 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.23■□□□□ 0.83
MMP3P08254 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.23■□□□□ 0.83
MMP3P08254 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.23■□□□□ 0.83
MMP3P08254 AL671883.3-201ENST00000603274 991 ntBASIC20.23■□□□□ 0.83
MMP3P08254 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.23■□□□□ 0.83
MMP3P08254 AL355877.3-201ENST00000622820 899 ntBASIC20.23■□□□□ 0.83
MMP3P08254 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.23■□□□□ 0.83
MMP3P08254 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.23■□□□□ 0.83
MMP3P08254 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MMP3P08254 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MMP3P08254 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MMP3P08254 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.23■□□□□ 0.83
MMP3P08254 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MMP3P08254 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.23■□□□□ 0.83
MMP3P08254 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.22■□□□□ 0.83
MMP3P08254 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MMP3P08254 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MMP3P08254 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
MMP3P08254 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MMP3P08254 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MMP3P08254 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
MMP3P08254 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
MMP3P08254 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MMP3P08254 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.22■□□□□ 0.83
MMP3P08254 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.22■□□□□ 0.83
MMP3P08254 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MMP3P08254 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.22■□□□□ 0.83
MMP3P08254 AF186996.4-201ENST00000467186 377 ntBASIC20.22■□□□□ 0.83
MMP3P08254 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.22■□□□□ 0.83
MMP3P08254 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.22■□□□□ 0.83
MMP3P08254 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.22■□□□□ 0.83
MMP3P08254 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.22■□□□□ 0.83
MMP3P08254 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MMP3P08254 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MMP3P08254 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MMP3P08254 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
MMP3P08254 IL9RP2-201ENST00000423948 1312 ntBASIC20.22■□□□□ 0.83
MMP3P08254 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MMP3P08254 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MMP3P08254 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
MMP3P08254 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
MMP3P08254 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.22■□□□□ 0.83
MMP3P08254 AC005082.1-201ENST00000413042 2259 ntBASIC20.22■□□□□ 0.83
MMP3P08254 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP3P08254 INTS4P1-201ENST00000438455 1935 ntBASIC20.21■□□□□ 0.83
MMP3P08254 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP3P08254 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MMP3P08254 AC125634.1-201ENST00000438758 1403 ntBASIC20.21■□□□□ 0.83
MMP3P08254 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.21■□□□□ 0.83
MMP3P08254 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP3P08254 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.21■□□□□ 0.83
MMP3P08254 KRT18P65-201ENST00000439811 1286 ntBASIC20.21■□□□□ 0.83
MMP3P08254 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.21■□□□□ 0.83
MMP3P08254 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
MMP3P08254 AC018712.1-201ENST00000455767 687 ntBASIC20.21■□□□□ 0.83
MMP3P08254 FGFR3P6-201ENST00000457012 610 ntBASIC20.21■□□□□ 0.83
MMP3P08254 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.21■□□□□ 0.83
MMP3P08254 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP3P08254 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MMP3P08254 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.21■□□□□ 0.83
MMP3P08254 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
MMP3P08254 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
MMP3P08254 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MMP3P08254 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.21■□□□□ 0.83
MMP3P08254 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP3P08254 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP3P08254 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP3P08254 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MMP3P08254 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP3P08254 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP3P08254 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP3P08254 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
MMP3P08254 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.2■□□□□ 0.82
MMP3P08254 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.2■□□□□ 0.82
MMP3P08254 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.2■□□□□ 0.82
MMP3P08254 AC011467.2-201ENST00000598425 242 ntBASIC20.2■□□□□ 0.82
MMP3P08254 AP001269.4-201ENST00000609611 512 ntBASIC20.2■□□□□ 0.82
MMP3P08254 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.2■□□□□ 0.82
MMP3P08254 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.2■□□□□ 0.82
MMP3P08254 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MMP3P08254 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP3P08254 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MMP3P08254 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP3P08254 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.2■□□□□ 0.82
MMP3P08254 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP3P08254 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP3P08254 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP3P08254 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP3P08254 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms