Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCATP04180 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.04■□□□□ 0.16
LCATP04180 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCATP04180 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.04■□□□□ 0.16
LCATP04180 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCATP04180 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCATP04180 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
LCATP04180 AL162741.1-201ENST00000565563 1558 ntBASIC16.04■□□□□ 0.16
LCATP04180 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.04■□□□□ 0.16
LCATP04180 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LCATP04180 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LCATP04180 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.04■□□□□ 0.16
LCATP04180 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LCATP04180 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.04■□□□□ 0.16
LCATP04180 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCATP04180 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCATP04180 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
LCATP04180 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCATP04180 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCATP04180 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCATP04180 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
LCATP04180 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.03■□□□□ 0.16
LCATP04180 AC099343.3-201ENST00000605834 2503 ntBASIC16.03■□□□□ 0.16
LCATP04180 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LCATP04180 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.03■□□□□ 0.16
LCATP04180 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.03■□□□□ 0.16
LCATP04180 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCATP04180 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCATP04180 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
LCATP04180 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCATP04180 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.03■□□□□ 0.16
LCATP04180 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.03■□□□□ 0.16
LCATP04180 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.03■□□□□ 0.16
LCATP04180 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCATP04180 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.03■□□□□ 0.16
LCATP04180 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LCATP04180 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCATP04180 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.03■□□□□ 0.16
LCATP04180 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LCATP04180 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCATP04180 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCATP04180 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCATP04180 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.03■□□□□ 0.16
LCATP04180 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LCATP04180 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCATP04180 ABALON-201ENST00000629058 1903 ntBASIC16.03■□□□□ 0.16
LCATP04180 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCATP04180 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LCATP04180 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCATP04180 AL354751.1-201ENST00000412768 1863 ntBASIC16.03■□□□□ 0.16
LCATP04180 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCATP04180 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCATP04180 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LCATP04180 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCATP04180 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCATP04180 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LCATP04180 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LCATP04180 KRT8P7-201ENST00000533003 1432 ntBASIC16.02■□□□□ 0.16
LCATP04180 HOXB1-202ENST00000577092 1414 ntBASIC16.02■□□□□ 0.16
LCATP04180 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LCATP04180 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LCATP04180 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.02■□□□□ 0.16
LCATP04180 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.02■□□□□ 0.16
LCATP04180 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LCATP04180 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LCATP04180 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LCATP04180 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
LCATP04180 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
LCATP04180 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LCATP04180 AC018470.1-201ENST00000624790 3129 ntBASIC16.02■□□□□ 0.16
LCATP04180 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
LCATP04180 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.02■□□□□ 0.16
LCATP04180 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.02■□□□□ 0.16
LCATP04180 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LCATP04180 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.02■□□□□ 0.16
LCATP04180 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LCATP04180 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
LCATP04180 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.02■□□□□ 0.16
LCATP04180 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LCATP04180 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LCATP04180 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.02■□□□□ 0.16
LCATP04180 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.02■□□□□ 0.16
LCATP04180 ECEL1P2-202ENST00000465689 757 ntBASIC16.02■□□□□ 0.16
LCATP04180 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.02■□□□□ 0.16
LCATP04180 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.02■□□□□ 0.16
LCATP04180 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
LCATP04180 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LCATP04180 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LCATP04180 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LCATP04180 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LCATP04180 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LCATP04180 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LCATP04180 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
LCATP04180 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LCATP04180 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LCATP04180 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LCATP04180 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.02■□□□□ 0.15
LCATP04180 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LCATP04180 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.02■□□□□ 0.15
LCATP04180 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms