Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
IFNA1P01562 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
IFNA1P01562 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
IFNA1P01562 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
IFNA1P01562 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
IFNA1P01562 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
IFNA1P01562 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
IFNA1P01562 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
IFNA1P01562 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
IFNA1P01562 PARP1-202ENST00000366792 553 ntTSL 3 BASIC14.52□□□□□ -0.09
IFNA1P01562 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
IFNA1P01562 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC14.52□□□□□ -0.09
IFNA1P01562 CYP2T3P-201ENST00000601990 817 ntBASIC14.52□□□□□ -0.09
IFNA1P01562 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
IFNA1P01562 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
IFNA1P01562 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.52□□□□□ -0.09
IFNA1P01562 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
IFNA1P01562 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
IFNA1P01562 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC14.52□□□□□ -0.09
IFNA1P01562 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.52□□□□□ -0.09
IFNA1P01562 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
IFNA1P01562 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
IFNA1P01562 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
IFNA1P01562 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC14.52□□□□□ -0.09
IFNA1P01562 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
IFNA1P01562 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
IFNA1P01562 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
IFNA1P01562 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
IFNA1P01562 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
IFNA1P01562 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
IFNA1P01562 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.51□□□□□ -0.09
IFNA1P01562 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
IFNA1P01562 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
IFNA1P01562 GAS2L1P1-201ENST00000420145 1480 ntBASIC14.51□□□□□ -0.09
IFNA1P01562 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
IFNA1P01562 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
IFNA1P01562 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
IFNA1P01562 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.51□□□□□ -0.09
IFNA1P01562 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
IFNA1P01562 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
IFNA1P01562 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.51□□□□□ -0.09
IFNA1P01562 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
IFNA1P01562 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
IFNA1P01562 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
IFNA1P01562 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
IFNA1P01562 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
IFNA1P01562 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
IFNA1P01562 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
IFNA1P01562 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
IFNA1P01562 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
IFNA1P01562 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC14.51□□□□□ -0.09
IFNA1P01562 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC14.51□□□□□ -0.09
IFNA1P01562 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
IFNA1P01562 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.51□□□□□ -0.09
IFNA1P01562 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
IFNA1P01562 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.51□□□□□ -0.09
IFNA1P01562 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
IFNA1P01562 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
IFNA1P01562 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
IFNA1P01562 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
IFNA1P01562 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
IFNA1P01562 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
IFNA1P01562 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
IFNA1P01562 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
IFNA1P01562 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
IFNA1P01562 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
IFNA1P01562 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
IFNA1P01562 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.5□□□□□ -0.09
IFNA1P01562 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
IFNA1P01562 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.5□□□□□ -0.09
IFNA1P01562 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
IFNA1P01562 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
IFNA1P01562 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.5□□□□□ -0.09
IFNA1P01562 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
IFNA1P01562 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.5□□□□□ -0.09
IFNA1P01562 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
IFNA1P01562 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
IFNA1P01562 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
IFNA1P01562 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
IFNA1P01562 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
IFNA1P01562 HLA-DQB1-201ENST00000374943 1656 ntBASIC14.5□□□□□ -0.09
IFNA1P01562 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
IFNA1P01562 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
IFNA1P01562 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
IFNA1P01562 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
IFNA1P01562 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
IFNA1P01562 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
IFNA1P01562 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC14.5□□□□□ -0.09
IFNA1P01562 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
IFNA1P01562 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
IFNA1P01562 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
IFNA1P01562 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
IFNA1P01562 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
IFNA1P01562 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
IFNA1P01562 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
IFNA1P01562 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
IFNA1P01562 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
IFNA1P01562 MTMR9LP-203ENST00000426597 1545 ntBASIC14.5□□□□□ -0.09
IFNA1P01562 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
IFNA1P01562 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms