Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.07■□□□□ 0.32
SOX30O94993 TSPY15P-201ENST00000457163 923 ntBASIC17.07■□□□□ 0.32
SOX30O94993 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SOX30O94993 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SOX30O94993 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.07■□□□□ 0.32
SOX30O94993 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.07■□□□□ 0.32
SOX30O94993 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.07■□□□□ 0.32
SOX30O94993 AC145285.6-201ENST00000604632 637 ntBASIC17.07■□□□□ 0.32
SOX30O94993 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.07■□□□□ 0.32
SOX30O94993 AC133561.5-201ENST00000635547 218 ntBASIC17.07■□□□□ 0.32
SOX30O94993 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SOX30O94993 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SOX30O94993 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SOX30O94993 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.07■□□□□ 0.32
SOX30O94993 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SOX30O94993 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.07■□□□□ 0.32
SOX30O94993 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SOX30O94993 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SOX30O94993 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SOX30O94993 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
SOX30O94993 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SOX30O94993 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.07■□□□□ 0.32
SOX30O94993 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SOX30O94993 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.06■□□□□ 0.32
SOX30O94993 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
SOX30O94993 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SOX30O94993 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SOX30O94993 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SOX30O94993 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SOX30O94993 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SOX30O94993 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SOX30O94993 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.06■□□□□ 0.32
SOX30O94993 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SOX30O94993 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.06■□□□□ 0.32
SOX30O94993 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SOX30O94993 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.06■□□□□ 0.32
SOX30O94993 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SOX30O94993 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.06■□□□□ 0.32
SOX30O94993 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.06■□□□□ 0.32
SOX30O94993 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
SOX30O94993 FAM87A-204ENST00000613235 858 ntBASIC17.06■□□□□ 0.32
SOX30O94993 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.06■□□□□ 0.32
SOX30O94993 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SOX30O94993 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SOX30O94993 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SOX30O94993 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SOX30O94993 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.06■□□□□ 0.32
SOX30O94993 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SOX30O94993 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SOX30O94993 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SOX30O94993 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SOX30O94993 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.06■□□□□ 0.32
SOX30O94993 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SOX30O94993 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SOX30O94993 AC093677.2-201ENST00000600169 1863 ntBASIC17.05■□□□□ 0.32
SOX30O94993 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SOX30O94993 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SOX30O94993 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SOX30O94993 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SOX30O94993 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SOX30O94993 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SOX30O94993 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SOX30O94993 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SOX30O94993 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SOX30O94993 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SOX30O94993 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SOX30O94993 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.05■□□□□ 0.32
SOX30O94993 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.05■□□□□ 0.32
SOX30O94993 SDHAP2-201ENST00000455183 2001 ntBASIC17.05■□□□□ 0.32
SOX30O94993 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SOX30O94993 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SOX30O94993 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SOX30O94993 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SOX30O94993 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SOX30O94993 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.05■□□□□ 0.32
SOX30O94993 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.05■□□□□ 0.32
SOX30O94993 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.05■□□□□ 0.32
SOX30O94993 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SOX30O94993 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SOX30O94993 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.05■□□□□ 0.32
SOX30O94993 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.05■□□□□ 0.32
SOX30O94993 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
SOX30O94993 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
SOX30O94993 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.05■□□□□ 0.32
SOX30O94993 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SOX30O94993 LTB4R2-202ENST00000528054 3092 ntBASIC17.05■□□□□ 0.32
SOX30O94993 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.05■□□□□ 0.32
SOX30O94993 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.05■□□□□ 0.32
SOX30O94993 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SOX30O94993 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SOX30O94993 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SOX30O94993 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SOX30O94993 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.05■□□□□ 0.32
SOX30O94993 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.05■□□□□ 0.32
SOX30O94993 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SOX30O94993 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SOX30O94993 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SOX30O94993 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SOX30O94993 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SOX30O94993 KRT8P9-201ENST00000558927 1449 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms