Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.52■□□□□ 0.23
PTP4A3O75365 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
PTP4A3O75365 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTP4A3O75365 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTP4A3O75365 AC092338.2-201ENST00000568827 1415 ntBASIC16.52■□□□□ 0.23
PTP4A3O75365 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
PTP4A3O75365 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PTP4A3O75365 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PTP4A3O75365 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTP4A3O75365 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTP4A3O75365 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTP4A3O75365 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTP4A3O75365 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTP4A3O75365 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
PTP4A3O75365 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTP4A3O75365 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PTP4A3O75365 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTP4A3O75365 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTP4A3O75365 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.51■□□□□ 0.23
PTP4A3O75365 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.51■□□□□ 0.23
PTP4A3O75365 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.51■□□□□ 0.23
PTP4A3O75365 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTP4A3O75365 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTP4A3O75365 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTP4A3O75365 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTP4A3O75365 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTP4A3O75365 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTP4A3O75365 UNC93B2-201ENST00000285383 730 ntBASIC16.51■□□□□ 0.23
PTP4A3O75365 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTP4A3O75365 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTP4A3O75365 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTP4A3O75365 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.51■□□□□ 0.23
PTP4A3O75365 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.51■□□□□ 0.23
PTP4A3O75365 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTP4A3O75365 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.51■□□□□ 0.23
PTP4A3O75365 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTP4A3O75365 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTP4A3O75365 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTP4A3O75365 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTP4A3O75365 LINC01126-201ENST00000623515 1646 ntBASIC16.51■□□□□ 0.23
PTP4A3O75365 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.51■□□□□ 0.23
PTP4A3O75365 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTP4A3O75365 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
PTP4A3O75365 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.51■□□□□ 0.23
PTP4A3O75365 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.5■□□□□ 0.23
PTP4A3O75365 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTP4A3O75365 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTP4A3O75365 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.5■□□□□ 0.23
PTP4A3O75365 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTP4A3O75365 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTP4A3O75365 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTP4A3O75365 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PTP4A3O75365 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTP4A3O75365 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTP4A3O75365 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTP4A3O75365 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.5■□□□□ 0.23
PTP4A3O75365 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.5■□□□□ 0.23
PTP4A3O75365 AC093010.1-201ENST00000473625 1624 ntBASIC16.5■□□□□ 0.23
PTP4A3O75365 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTP4A3O75365 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.5■□□□□ 0.23
PTP4A3O75365 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
PTP4A3O75365 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.5■□□□□ 0.23
PTP4A3O75365 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.5■□□□□ 0.23
PTP4A3O75365 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.5■□□□□ 0.23
PTP4A3O75365 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.5■□□□□ 0.23
PTP4A3O75365 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTP4A3O75365 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.5■□□□□ 0.23
PTP4A3O75365 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.5■□□□□ 0.23
PTP4A3O75365 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.5■□□□□ 0.23
PTP4A3O75365 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
PTP4A3O75365 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PTP4A3O75365 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.5■□□□□ 0.23
PTP4A3O75365 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTP4A3O75365 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PTP4A3O75365 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
PTP4A3O75365 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
PTP4A3O75365 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTP4A3O75365 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PTP4A3O75365 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTP4A3O75365 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.49■□□□□ 0.23
PTP4A3O75365 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTP4A3O75365 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
PTP4A3O75365 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTP4A3O75365 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.49■□□□□ 0.23
PTP4A3O75365 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.49■□□□□ 0.23
PTP4A3O75365 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTP4A3O75365 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTP4A3O75365 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
PTP4A3O75365 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.49■□□□□ 0.23
PTP4A3O75365 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.49■□□□□ 0.23
PTP4A3O75365 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.49■□□□□ 0.23
PTP4A3O75365 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.49■□□□□ 0.23
PTP4A3O75365 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.49■□□□□ 0.23
PTP4A3O75365 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.49■□□□□ 0.23
PTP4A3O75365 AC104390.1-201ENST00000555663 520 ntBASIC16.49■□□□□ 0.23
PTP4A3O75365 FITM1-202ENST00000559294 800 ntBASIC16.49■□□□□ 0.23
PTP4A3O75365 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.49■□□□□ 0.23
PTP4A3O75365 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PTP4A3O75365 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.49■□□□□ 0.23
PTP4A3O75365 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms