Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.53■□□□□ 0.56
CDH16O75309 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.53■□□□□ 0.56
CDH16O75309 MTDHP1-201ENST00000605323 784 ntBASIC18.53■□□□□ 0.56
CDH16O75309 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDH16O75309 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.53■□□□□ 0.56
CDH16O75309 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH16O75309 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH16O75309 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH16O75309 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.53■□□□□ 0.56
CDH16O75309 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH16O75309 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CDH16O75309 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH16O75309 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
CDH16O75309 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CDH16O75309 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDH16O75309 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDH16O75309 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDH16O75309 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CDH16O75309 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH16O75309 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH16O75309 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH16O75309 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH16O75309 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH16O75309 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDH16O75309 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.52■□□□□ 0.56
CDH16O75309 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CDH16O75309 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.52■□□□□ 0.56
CDH16O75309 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDH16O75309 AC091390.4-202ENST00000476426 537 ntBASIC18.52■□□□□ 0.56
CDH16O75309 UNC93B5-201ENST00000530315 699 ntBASIC18.52■□□□□ 0.56
CDH16O75309 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.52■□□□□ 0.56
CDH16O75309 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.52■□□□□ 0.56
CDH16O75309 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.52■□□□□ 0.56
CDH16O75309 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDH16O75309 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDH16O75309 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH16O75309 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.52■□□□□ 0.56
CDH16O75309 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDH16O75309 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDH16O75309 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDH16O75309 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDH16O75309 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CDH16O75309 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CDH16O75309 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.52■□□□□ 0.55
CDH16O75309 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CDH16O75309 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.52■□□□□ 0.55
CDH16O75309 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CDH16O75309 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDH16O75309 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.51■□□□□ 0.55
CDH16O75309 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH16O75309 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDH16O75309 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CDH16O75309 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CDH16O75309 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.51■□□□□ 0.55
CDH16O75309 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.51■□□□□ 0.55
CDH16O75309 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH16O75309 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDH16O75309 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
CDH16O75309 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.51■□□□□ 0.55
CDH16O75309 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.51■□□□□ 0.55
CDH16O75309 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.51■□□□□ 0.55
CDH16O75309 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDH16O75309 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CDH16O75309 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH16O75309 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CDH16O75309 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDH16O75309 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
CDH16O75309 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH16O75309 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.51■□□□□ 0.55
CDH16O75309 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH16O75309 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CDH16O75309 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDH16O75309 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDH16O75309 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH16O75309 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDH16O75309 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.5■□□□□ 0.55
CDH16O75309 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH16O75309 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH16O75309 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH16O75309 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH16O75309 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.5■□□□□ 0.55
CDH16O75309 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH16O75309 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH16O75309 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH16O75309 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDH16O75309 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CDH16O75309 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.5■□□□□ 0.55
CDH16O75309 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH16O75309 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.5■□□□□ 0.55
CDH16O75309 CKBP1-201ENST00000565489 1086 ntBASIC18.5■□□□□ 0.55
CDH16O75309 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDH16O75309 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.5■□□□□ 0.55
CDH16O75309 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH16O75309 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH16O75309 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CDH16O75309 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH16O75309 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH16O75309 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.5■□□□□ 0.55
CDH16O75309 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH16O75309 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms