Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE3O75131 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE3O75131 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE3O75131 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE3O75131 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE3O75131 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.58■□□□□ 0.4
CPNE3O75131 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE3O75131 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.58■□□□□ 0.4
CPNE3O75131 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE3O75131 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE3O75131 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.58■□□□□ 0.4
CPNE3O75131 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.58■□□□□ 0.4
CPNE3O75131 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE3O75131 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CPNE3O75131 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE3O75131 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
CPNE3O75131 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.57■□□□□ 0.4
CPNE3O75131 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE3O75131 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.57■□□□□ 0.4
CPNE3O75131 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
CPNE3O75131 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE3O75131 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE3O75131 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CPNE3O75131 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE3O75131 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE3O75131 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE3O75131 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.57■□□□□ 0.4
CPNE3O75131 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.57■□□□□ 0.4
CPNE3O75131 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.57■□□□□ 0.4
CPNE3O75131 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE3O75131 KRT8P26-201ENST00000534154 1276 ntBASIC17.57■□□□□ 0.4
CPNE3O75131 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.57■□□□□ 0.4
CPNE3O75131 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.57■□□□□ 0.4
CPNE3O75131 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE3O75131 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE3O75131 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE3O75131 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CPNE3O75131 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE3O75131 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE3O75131 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE3O75131 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.57■□□□□ 0.4
CPNE3O75131 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.57■□□□□ 0.4
CPNE3O75131 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
CPNE3O75131 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CPNE3O75131 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE3O75131 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE3O75131 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE3O75131 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE3O75131 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.56■□□□□ 0.4
CPNE3O75131 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CPNE3O75131 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CPNE3O75131 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE3O75131 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.56■□□□□ 0.4
CPNE3O75131 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE3O75131 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.56■□□□□ 0.4
CPNE3O75131 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CPNE3O75131 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE3O75131 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CPNE3O75131 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE3O75131 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE3O75131 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE3O75131 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE3O75131 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE3O75131 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.56■□□□□ 0.4
CPNE3O75131 AL450487.1-201ENST00000426799 995 ntBASIC17.56■□□□□ 0.4
CPNE3O75131 PVRIG2P-201ENST00000435460 978 ntBASIC17.56■□□□□ 0.4
CPNE3O75131 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE3O75131 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.56■□□□□ 0.4
CPNE3O75131 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.56■□□□□ 0.4
CPNE3O75131 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.56■□□□□ 0.4
CPNE3O75131 AC092329.2-201ENST00000598402 547 ntBASIC17.56■□□□□ 0.4
CPNE3O75131 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.56■□□□□ 0.4
CPNE3O75131 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE3O75131 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CPNE3O75131 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.56■□□□□ 0.4
CPNE3O75131 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE3O75131 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE3O75131 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE3O75131 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE3O75131 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE3O75131 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE3O75131 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE3O75131 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE3O75131 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE3O75131 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.56■□□□□ 0.4
CPNE3O75131 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
CPNE3O75131 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE3O75131 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.56■□□□□ 0.4
CPNE3O75131 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.56■□□□□ 0.4
CPNE3O75131 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.56■□□□□ 0.4
CPNE3O75131 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CPNE3O75131 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE3O75131 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CPNE3O75131 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE3O75131 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CPNE3O75131 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE3O75131 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
CPNE3O75131 AC016734.2-201ENST00000624325 1377 ntBASIC17.55■□□□□ 0.4
CPNE3O75131 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE3O75131 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms