Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.4■□□□□ 0.22
PFDN1O60925 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
PFDN1O60925 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PFDN1O60925 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PFDN1O60925 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.4■□□□□ 0.22
PFDN1O60925 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PFDN1O60925 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PFDN1O60925 PAUPAR-201ENST00000630360 2965 ntBASIC16.4■□□□□ 0.22
PFDN1O60925 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PFDN1O60925 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PFDN1O60925 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PFDN1O60925 AC067930.6-201ENST00000623257 4947 ntBASIC16.4■□□□□ 0.22
PFDN1O60925 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PFDN1O60925 IDNK-201ENST00000376417 511 ntTSL 5 BASIC16.4■□□□□ 0.22
PFDN1O60925 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PFDN1O60925 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PFDN1O60925 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PFDN1O60925 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PFDN1O60925 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PFDN1O60925 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.4■□□□□ 0.22
PFDN1O60925 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PFDN1O60925 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PFDN1O60925 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PFDN1O60925 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PFDN1O60925 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PFDN1O60925 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PFDN1O60925 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC16.4■□□□□ 0.22
PFDN1O60925 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PFDN1O60925 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.4■□□□□ 0.22
PFDN1O60925 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.4■□□□□ 0.22
PFDN1O60925 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.22
PFDN1O60925 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.39■□□□□ 0.22
PFDN1O60925 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.39■□□□□ 0.22
PFDN1O60925 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
PFDN1O60925 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PFDN1O60925 AC024909.3-201ENST00000611513 2257 ntBASIC16.39■□□□□ 0.21
PFDN1O60925 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PFDN1O60925 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PFDN1O60925 LYSMD4-203ENST00000378904 2122 ntBASIC16.39■□□□□ 0.21
PFDN1O60925 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC16.39■□□□□ 0.21
PFDN1O60925 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PFDN1O60925 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PFDN1O60925 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PFDN1O60925 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.39■□□□□ 0.21
PFDN1O60925 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PFDN1O60925 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PFDN1O60925 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.39■□□□□ 0.21
PFDN1O60925 AL603756.1-201ENST00000606511 2163 ntBASIC16.39■□□□□ 0.21
PFDN1O60925 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PFDN1O60925 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PFDN1O60925 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PFDN1O60925 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PFDN1O60925 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PFDN1O60925 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PFDN1O60925 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PFDN1O60925 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PFDN1O60925 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PFDN1O60925 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.39■□□□□ 0.21
PFDN1O60925 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PFDN1O60925 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.39■□□□□ 0.21
PFDN1O60925 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PFDN1O60925 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PFDN1O60925 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PFDN1O60925 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PFDN1O60925 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
PFDN1O60925 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
PFDN1O60925 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PFDN1O60925 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PFDN1O60925 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.38■□□□□ 0.21
PFDN1O60925 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.38■□□□□ 0.21
PFDN1O60925 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PFDN1O60925 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PFDN1O60925 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PFDN1O60925 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PFDN1O60925 AC022188.1-201ENST00000620960 1664 ntBASIC16.38■□□□□ 0.21
PFDN1O60925 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PFDN1O60925 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PFDN1O60925 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PFDN1O60925 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC16.38■□□□□ 0.21
PFDN1O60925 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PFDN1O60925 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC16.38■□□□□ 0.21
PFDN1O60925 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PFDN1O60925 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
PFDN1O60925 SBF1P1-201ENST00000444527 5631 ntBASIC16.38■□□□□ 0.21
PFDN1O60925 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
PFDN1O60925 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PFDN1O60925 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.38■□□□□ 0.21
PFDN1O60925 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PFDN1O60925 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
PFDN1O60925 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PFDN1O60925 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.38■□□□□ 0.21
PFDN1O60925 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PFDN1O60925 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN1O60925 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.37■□□□□ 0.21
PFDN1O60925 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PFDN1O60925 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
PFDN1O60925 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.37■□□□□ 0.21
PFDN1O60925 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PFDN1O60925 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC16.37■□□□□ 0.21
PFDN1O60925 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms