Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF2O60811 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF2O60811 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF2O60811 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF2O60811 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.2■□□□□ 0.34
PRAMEF2O60811 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF2O60811 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PRAMEF2O60811 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.2■□□□□ 0.34
PRAMEF2O60811 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF2O60811 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF2O60811 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF2O60811 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF2O60811 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.2■□□□□ 0.34
PRAMEF2O60811 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF2O60811 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF2O60811 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.2■□□□□ 0.34
PRAMEF2O60811 RASA4DP-201ENST00000460726 1199 ntBASIC17.2■□□□□ 0.34
PRAMEF2O60811 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
PRAMEF2O60811 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.2■□□□□ 0.34
PRAMEF2O60811 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.2■□□□□ 0.34
PRAMEF2O60811 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.2■□□□□ 0.34
PRAMEF2O60811 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF2O60811 AC024243.1-201ENST00000609234 778 ntBASIC17.2■□□□□ 0.34
PRAMEF2O60811 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.2■□□□□ 0.34
PRAMEF2O60811 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.2■□□□□ 0.34
PRAMEF2O60811 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF2O60811 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.2■□□□□ 0.34
PRAMEF2O60811 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.2■□□□□ 0.34
PRAMEF2O60811 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PRAMEF2O60811 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF2O60811 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PRAMEF2O60811 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.2■□□□□ 0.34
PRAMEF2O60811 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF2O60811 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.2■□□□□ 0.34
PRAMEF2O60811 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.2■□□□□ 0.34
PRAMEF2O60811 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF2O60811 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF2O60811 AC090164.3-201ENST00000610780 2143 ntBASIC17.2■□□□□ 0.34
PRAMEF2O60811 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PRAMEF2O60811 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF2O60811 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.19■□□□□ 0.34
PRAMEF2O60811 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF2O60811 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
PRAMEF2O60811 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PRAMEF2O60811 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
PRAMEF2O60811 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF2O60811 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF2O60811 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF2O60811 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.19■□□□□ 0.34
PRAMEF2O60811 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF2O60811 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.19■□□□□ 0.34
PRAMEF2O60811 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.19■□□□□ 0.34
PRAMEF2O60811 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PRAMEF2O60811 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.19■□□□□ 0.34
PRAMEF2O60811 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.19■□□□□ 0.34
PRAMEF2O60811 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF2O60811 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
PRAMEF2O60811 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.19■□□□□ 0.34
PRAMEF2O60811 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.19■□□□□ 0.34
PRAMEF2O60811 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF2O60811 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF2O60811 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF2O60811 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PRAMEF2O60811 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF2O60811 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.19■□□□□ 0.34
PRAMEF2O60811 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF2O60811 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF2O60811 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.19■□□□□ 0.34
PRAMEF2O60811 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF2O60811 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF2O60811 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF2O60811 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF2O60811 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF2O60811 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF2O60811 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF2O60811 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF2O60811 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF2O60811 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.18■□□□□ 0.34
PRAMEF2O60811 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF2O60811 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF2O60811 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.18■□□□□ 0.34
PRAMEF2O60811 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF2O60811 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF2O60811 AL163051.1-201ENST00000569214 1512 ntBASIC17.18■□□□□ 0.34
PRAMEF2O60811 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
PRAMEF2O60811 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF2O60811 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF2O60811 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF2O60811 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.18■□□□□ 0.34
PRAMEF2O60811 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.18■□□□□ 0.34
PRAMEF2O60811 SEC1P-202ENST00000473944 940 ntBASIC17.18■□□□□ 0.34
PRAMEF2O60811 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.18■□□□□ 0.34
PRAMEF2O60811 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.18■□□□□ 0.34
PRAMEF2O60811 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.18■□□□□ 0.34
PRAMEF2O60811 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF2O60811 AC010240.3-201ENST00000607688 395 ntBASIC17.18■□□□□ 0.34
PRAMEF2O60811 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF2O60811 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.18■□□□□ 0.34
PRAMEF2O60811 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.18■□□□□ 0.34
PRAMEF2O60811 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms