Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.73■□□□□ 0.43
GFRA3O60609 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.73■□□□□ 0.43
GFRA3O60609 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.73■□□□□ 0.43
GFRA3O60609 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GFRA3O60609 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GFRA3O60609 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GFRA3O60609 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GFRA3O60609 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GFRA3O60609 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.73■□□□□ 0.43
GFRA3O60609 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.73■□□□□ 0.43
GFRA3O60609 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GFRA3O60609 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GFRA3O60609 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GFRA3O60609 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.72■□□□□ 0.43
GFRA3O60609 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
GFRA3O60609 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
GFRA3O60609 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GFRA3O60609 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.72■□□□□ 0.43
GFRA3O60609 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GFRA3O60609 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GFRA3O60609 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.72■□□□□ 0.43
GFRA3O60609 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GFRA3O60609 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.72■□□□□ 0.43
GFRA3O60609 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.72■□□□□ 0.43
GFRA3O60609 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
GFRA3O60609 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.72■□□□□ 0.43
GFRA3O60609 AC027307.3-201ENST00000594262 1100 ntBASIC17.72■□□□□ 0.43
GFRA3O60609 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.72■□□□□ 0.43
GFRA3O60609 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.72■□□□□ 0.43
GFRA3O60609 AC105339.1-204ENST00000636249 355 ntBASIC17.72■□□□□ 0.43
GFRA3O60609 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GFRA3O60609 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GFRA3O60609 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
GFRA3O60609 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GFRA3O60609 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.72■□□□□ 0.43
GFRA3O60609 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
GFRA3O60609 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
GFRA3O60609 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
GFRA3O60609 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.71■□□□□ 0.43
GFRA3O60609 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GFRA3O60609 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.71■□□□□ 0.43
GFRA3O60609 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
GFRA3O60609 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
GFRA3O60609 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
GFRA3O60609 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GFRA3O60609 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.71■□□□□ 0.43
GFRA3O60609 SLC25A6P5-201ENST00000435663 894 ntBASIC17.71■□□□□ 0.43
GFRA3O60609 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GFRA3O60609 FAM207CP-201ENST00000443486 507 ntBASIC17.71■□□□□ 0.43
GFRA3O60609 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.71■□□□□ 0.43
GFRA3O60609 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
GFRA3O60609 AC108073.2-201ENST00000464002 357 ntBASIC17.71■□□□□ 0.43
GFRA3O60609 AC113404.2-201ENST00000507884 177 ntBASIC17.71■□□□□ 0.43
GFRA3O60609 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.71■□□□□ 0.43
GFRA3O60609 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GFRA3O60609 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.71■□□□□ 0.43
GFRA3O60609 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.71■□□□□ 0.43
GFRA3O60609 AC015911.4-201ENST00000588022 1070 ntBASIC17.71■□□□□ 0.43
GFRA3O60609 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.71■□□□□ 0.43
GFRA3O60609 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.71■□□□□ 0.43
GFRA3O60609 AC008761.3-201ENST00000624803 892 ntBASIC17.71■□□□□ 0.43
GFRA3O60609 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GFRA3O60609 AC007375.3-201ENST00000600936 2314 ntBASIC17.71■□□□□ 0.43
GFRA3O60609 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GFRA3O60609 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GFRA3O60609 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
GFRA3O60609 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GFRA3O60609 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
GFRA3O60609 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
GFRA3O60609 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GFRA3O60609 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.7■□□□□ 0.42
GFRA3O60609 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GFRA3O60609 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GFRA3O60609 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.7■□□□□ 0.42
GFRA3O60609 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GFRA3O60609 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
GFRA3O60609 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GFRA3O60609 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
GFRA3O60609 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.7■□□□□ 0.42
GFRA3O60609 MTCL1P1-201ENST00000446207 792 ntBASIC17.7■□□□□ 0.42
GFRA3O60609 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GFRA3O60609 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.7■□□□□ 0.42
GFRA3O60609 LINC02560-201ENST00000596379 459 ntBASIC17.7■□□□□ 0.42
GFRA3O60609 AC004877.2-201ENST00000623941 599 ntBASIC17.7■□□□□ 0.42
GFRA3O60609 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.7■□□□□ 0.42
GFRA3O60609 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.7■□□□□ 0.42
GFRA3O60609 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GFRA3O60609 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GFRA3O60609 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GFRA3O60609 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GFRA3O60609 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
GFRA3O60609 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
GFRA3O60609 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.7■□□□□ 0.42
GFRA3O60609 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GFRA3O60609 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
GFRA3O60609 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.69■□□□□ 0.42
GFRA3O60609 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GFRA3O60609 AC079776.2-201ENST00000641154 1609 ntBASIC17.69■□□□□ 0.42
GFRA3O60609 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
GFRA3O60609 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms