Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LCMT2O60294 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.52■□□□□ 0.4
LCMT2O60294 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.52■□□□□ 0.4
LCMT2O60294 HLA-F-220ENST00000434407 884 ntBASIC17.52■□□□□ 0.4
LCMT2O60294 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.52■□□□□ 0.4
LCMT2O60294 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.52■□□□□ 0.4
LCMT2O60294 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.52■□□□□ 0.4
LCMT2O60294 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.52■□□□□ 0.4
LCMT2O60294 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.52■□□□□ 0.4
LCMT2O60294 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.52■□□□□ 0.4
LCMT2O60294 AL136038.4-201ENST00000603606 1261 ntBASIC17.52■□□□□ 0.4
LCMT2O60294 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.52■□□□□ 0.4
LCMT2O60294 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.52■□□□□ 0.4
LCMT2O60294 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LCMT2O60294 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LCMT2O60294 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LCMT2O60294 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LCMT2O60294 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
LCMT2O60294 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LCMT2O60294 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LCMT2O60294 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LCMT2O60294 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
LCMT2O60294 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
LCMT2O60294 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LCMT2O60294 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LCMT2O60294 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LCMT2O60294 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LCMT2O60294 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LCMT2O60294 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LCMT2O60294 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
LCMT2O60294 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.51■□□□□ 0.39
LCMT2O60294 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.51■□□□□ 0.39
LCMT2O60294 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.51■□□□□ 0.39
LCMT2O60294 LINC01311-201ENST00000565162 1445 ntBASIC17.51■□□□□ 0.39
LCMT2O60294 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LCMT2O60294 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
LCMT2O60294 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.51■□□□□ 0.39
LCMT2O60294 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.51■□□□□ 0.39
LCMT2O60294 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.51■□□□□ 0.39
LCMT2O60294 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LCMT2O60294 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.51■□□□□ 0.39
LCMT2O60294 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LCMT2O60294 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LCMT2O60294 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LCMT2O60294 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
LCMT2O60294 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LCMT2O60294 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
LCMT2O60294 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LCMT2O60294 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LCMT2O60294 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LCMT2O60294 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.5■□□□□ 0.39
LCMT2O60294 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LCMT2O60294 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.5■□□□□ 0.39
LCMT2O60294 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LCMT2O60294 LINC01238-205ENST00000567549 1107 ntBASIC17.5■□□□□ 0.39
LCMT2O60294 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.5■□□□□ 0.39
LCMT2O60294 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.5■□□□□ 0.39
LCMT2O60294 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.5■□□□□ 0.39
LCMT2O60294 AC083849.1-201ENST00000615227 514 ntBASIC17.5■□□□□ 0.39
LCMT2O60294 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
LCMT2O60294 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LCMT2O60294 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LCMT2O60294 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.5■□□□□ 0.39
LCMT2O60294 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LCMT2O60294 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
LCMT2O60294 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LCMT2O60294 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LCMT2O60294 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LCMT2O60294 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LCMT2O60294 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
LCMT2O60294 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.5■□□□□ 0.39
LCMT2O60294 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LCMT2O60294 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LCMT2O60294 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.5■□□□□ 0.39
LCMT2O60294 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.5■□□□□ 0.39
LCMT2O60294 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LCMT2O60294 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.49■□□□□ 0.39
LCMT2O60294 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LCMT2O60294 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LCMT2O60294 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LCMT2O60294 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LCMT2O60294 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LCMT2O60294 PHGDH-209ENST00000641074 1780 ntBASIC17.49■□□□□ 0.39
LCMT2O60294 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LCMT2O60294 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.49■□□□□ 0.39
LCMT2O60294 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.49■□□□□ 0.39
LCMT2O60294 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LCMT2O60294 SPDYE13P-201ENST00000445314 798 ntBASIC17.49■□□□□ 0.39
LCMT2O60294 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.49■□□□□ 0.39
LCMT2O60294 AL671277.2-201ENST00000458060 996 ntBASIC17.49■□□□□ 0.39
LCMT2O60294 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
LCMT2O60294 AL590326.2-201ENST00000625139 305 ntBASIC17.49■□□□□ 0.39
LCMT2O60294 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LCMT2O60294 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LCMT2O60294 AC135050.7-201ENST00000624508 2218 ntBASIC17.49■□□□□ 0.39
LCMT2O60294 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LCMT2O60294 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LCMT2O60294 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LCMT2O60294 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LCMT2O60294 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms