Protein–RNA interactions for Protein: O60271

SPAG9, C-Jun-amino-terminal kinase-interacting protein 4, humanhuman

Known RBP Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPAG9O60271 DNAJB3-201ENST00000446806 729 ntBASIC27.19■■□□□ 1.94
SPAG9O60271 AC004967.1-201ENST00000453589 447 ntBASIC27.19■■□□□ 1.94
SPAG9O60271 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC27.19■■□□□ 1.94
SPAG9O60271 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC27.19■■□□□ 1.94
SPAG9O60271 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC27.19■■□□□ 1.94
SPAG9O60271 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
SPAG9O60271 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
SPAG9O60271 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC27.19■■□□□ 1.94
SPAG9O60271 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC27.19■■□□□ 1.94
SPAG9O60271 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC27.19■■□□□ 1.94
SPAG9O60271 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC27.19■■□□□ 1.94
SPAG9O60271 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC27.19■■□□□ 1.94
SPAG9O60271 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
SPAG9O60271 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SPAG9O60271 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC27.18■■□□□ 1.94
SPAG9O60271 HNRNPA1P28-201ENST00000424481 961 ntBASIC27.18■■□□□ 1.94
SPAG9O60271 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC27.18■■□□□ 1.94
SPAG9O60271 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC27.18■■□□□ 1.94
SPAG9O60271 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
SPAG9O60271 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC27.18■■□□□ 1.94
SPAG9O60271 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC27.18■■□□□ 1.94
SPAG9O60271 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC27.18■■□□□ 1.94
SPAG9O60271 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC27.18■■□□□ 1.94
SPAG9O60271 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC27.18■■□□□ 1.94
SPAG9O60271 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SPAG9O60271 USP48-205ENST00000421625 2818 ntTSL 2 BASIC27.18■■□□□ 1.94
SPAG9O60271 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SPAG9O60271 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SPAG9O60271 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC27.18■■□□□ 1.94
SPAG9O60271 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
SPAG9O60271 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC27.18■■□□□ 1.94
SPAG9O60271 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SPAG9O60271 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SPAG9O60271 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SPAG9O60271 KIRREL3-AS3-201ENST00000404882 831 ntBASIC27.17■■□□□ 1.94
SPAG9O60271 AC004832.2-201ENST00000426397 482 ntBASIC27.17■■□□□ 1.94
SPAG9O60271 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SPAG9O60271 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC27.17■■□□□ 1.94
SPAG9O60271 RNF151-202ENST00000569210 853 ntTSL 2 BASIC27.17■■□□□ 1.94
SPAG9O60271 AP000867.4-201ENST00000641616 219 ntBASIC27.17■■□□□ 1.94
SPAG9O60271 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
SPAG9O60271 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SPAG9O60271 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SPAG9O60271 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SPAG9O60271 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC27.17■■□□□ 1.94
SPAG9O60271 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC27.17■■□□□ 1.94
SPAG9O60271 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SPAG9O60271 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC27.17■■□□□ 1.94
SPAG9O60271 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SPAG9O60271 AL161938.1-201ENST00000569833 2180 ntBASIC27.17■■□□□ 1.94
SPAG9O60271 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
SPAG9O60271 PMP22-202ENST00000395936 816 ntTSL 3 BASIC27.16■■□□□ 1.94
SPAG9O60271 RPS8P6-201ENST00000426177 609 ntBASIC27.16■■□□□ 1.94
SPAG9O60271 AC007967.2-201ENST00000432613 625 ntBASIC27.16■■□□□ 1.94
SPAG9O60271 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC27.16■■□□□ 1.94
SPAG9O60271 RNA5SP416-201ENST00000516838 111 ntBASIC27.16■■□□□ 1.94
SPAG9O60271 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC27.16■■□□□ 1.94
SPAG9O60271 RPS29-206ENST00000557111 488 ntTSL 2 BASIC27.16■■□□□ 1.94
SPAG9O60271 AC027796.2-201ENST00000575326 344 ntBASIC27.16■■□□□ 1.94
SPAG9O60271 MIR3687-2-201ENST00000577708 61 ntBASIC27.16■■□□□ 1.94
SPAG9O60271 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC27.16■■□□□ 1.94
SPAG9O60271 CYGB-205ENST00000590175 830 ntTSL 3 BASIC27.16■■□□□ 1.94
SPAG9O60271 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC27.16■■□□□ 1.94
SPAG9O60271 MIR3687-1-201ENST00000614492 61 ntBASIC27.16■■□□□ 1.94
SPAG9O60271 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
SPAG9O60271 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC27.16■■□□□ 1.94
SPAG9O60271 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SPAG9O60271 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
SPAG9O60271 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SPAG9O60271 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC27.16■■□□□ 1.94
SPAG9O60271 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SPAG9O60271 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC27.16■■□□□ 1.94
SPAG9O60271 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SPAG9O60271 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SPAG9O60271 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SPAG9O60271 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
SPAG9O60271 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SPAG9O60271 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SPAG9O60271 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SPAG9O60271 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SPAG9O60271 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SPAG9O60271 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SPAG9O60271 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
SPAG9O60271 LAGE3P1-201ENST00000425356 484 ntBASIC27.16■■□□□ 1.94
SPAG9O60271 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC27.16■■□□□ 1.94
SPAG9O60271 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SPAG9O60271 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC27.16■■□□□ 1.94
SPAG9O60271 AC112698.1-201ENST00000510299 916 ntBASIC27.16■■□□□ 1.94
SPAG9O60271 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SPAG9O60271 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
SPAG9O60271 AC134684.3-201ENST00000641758 218 ntBASIC27.16■■□□□ 1.94
SPAG9O60271 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC27.15■■□□□ 1.94
SPAG9O60271 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC27.15■■□□□ 1.94
SPAG9O60271 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SPAG9O60271 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC27.15■■□□□ 1.94
SPAG9O60271 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SPAG9O60271 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
SPAG9O60271 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SPAG9O60271 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SPAG9O60271 BID-204ENST00000399767 2129 ntTSL 2 BASIC27.15■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms