Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSSCA1O60232 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.96□□□□□ -0.01
SSSCA1O60232 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC14.96□□□□□ -0.01
SSSCA1O60232 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.96□□□□□ -0.01
SSSCA1O60232 SLC29A4P2-201ENST00000504749 1089 ntBASIC14.96□□□□□ -0.01
SSSCA1O60232 AC091874.3-201ENST00000512672 1195 ntBASIC14.96□□□□□ -0.01
SSSCA1O60232 PNMA6B-201ENST00000538162 1200 ntBASIC14.96□□□□□ -0.01
SSSCA1O60232 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSSCA1O60232 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC14.96□□□□□ -0.01
SSSCA1O60232 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSSCA1O60232 AL050303.2-201ENST00000619798 666 ntBASIC14.96□□□□□ -0.01
SSSCA1O60232 HLA-B-256ENST00000639848 1089 ntBASIC14.96□□□□□ -0.01
SSSCA1O60232 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SSSCA1O60232 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.96□□□□□ -0.01
SSSCA1O60232 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
SSSCA1O60232 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSSCA1O60232 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
SSSCA1O60232 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.96□□□□□ -0.01
SSSCA1O60232 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SSSCA1O60232 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SSSCA1O60232 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SSSCA1O60232 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SSSCA1O60232 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SSSCA1O60232 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SSSCA1O60232 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SSSCA1O60232 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSSCA1O60232 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC14.95□□□□□ -0.02
SSSCA1O60232 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC14.95□□□□□ -0.02
SSSCA1O60232 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSSCA1O60232 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SSSCA1O60232 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSSCA1O60232 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC14.95□□□□□ -0.02
SSSCA1O60232 AD000864.1-201ENST00000624076 2295 ntBASIC14.95□□□□□ -0.02
SSSCA1O60232 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.95□□□□□ -0.02
SSSCA1O60232 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSSCA1O60232 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SSSCA1O60232 AL096828.2-201ENST00000567259 1965 ntBASIC14.95□□□□□ -0.02
SSSCA1O60232 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SSSCA1O60232 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC14.95□□□□□ -0.02
SSSCA1O60232 GATS-209ENST00000454084 1030 ntTSL 3 BASIC14.95□□□□□ -0.02
SSSCA1O60232 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC14.95□□□□□ -0.02
SSSCA1O60232 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC14.95□□□□□ -0.02
SSSCA1O60232 OR2A1-AS1-207ENST00000486094 819 ntBASIC14.95□□□□□ -0.02
SSSCA1O60232 BET1L-207ENST00000529614 560 ntTSL 5 BASIC14.95□□□□□ -0.02
SSSCA1O60232 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SSSCA1O60232 C1QL1P1-201ENST00000568105 661 ntBASIC14.95□□□□□ -0.02
SSSCA1O60232 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC14.95□□□□□ -0.02
SSSCA1O60232 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SSSCA1O60232 AC141586.5-201ENST00000624546 2050 ntBASIC14.95□□□□□ -0.02
SSSCA1O60232 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SSSCA1O60232 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SSSCA1O60232 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSSCA1O60232 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSSCA1O60232 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSSCA1O60232 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSSCA1O60232 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.95□□□□□ -0.02
SSSCA1O60232 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSSCA1O60232 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSSCA1O60232 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC14.95□□□□□ -0.02
SSSCA1O60232 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SSSCA1O60232 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSSCA1O60232 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSSCA1O60232 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSSCA1O60232 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC14.94□□□□□ -0.02
SSSCA1O60232 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSSCA1O60232 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SSSCA1O60232 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSSCA1O60232 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSSCA1O60232 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSSCA1O60232 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSSCA1O60232 TNRC18P3-201ENST00000441896 2691 ntBASIC14.94□□□□□ -0.02
SSSCA1O60232 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SSSCA1O60232 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSSCA1O60232 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC14.94□□□□□ -0.02
SSSCA1O60232 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SSSCA1O60232 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSSCA1O60232 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSSCA1O60232 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSSCA1O60232 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSSCA1O60232 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SSSCA1O60232 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SSSCA1O60232 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSSCA1O60232 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSSCA1O60232 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.94□□□□□ -0.02
SSSCA1O60232 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC14.94□□□□□ -0.02
SSSCA1O60232 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSSCA1O60232 MIR663A-201ENST00000385250 93 ntBASIC14.94□□□□□ -0.02
SSSCA1O60232 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.94□□□□□ -0.02
SSSCA1O60232 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC14.94□□□□□ -0.02
SSSCA1O60232 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC14.94□□□□□ -0.02
SSSCA1O60232 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSSCA1O60232 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSSCA1O60232 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.94□□□□□ -0.02
SSSCA1O60232 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC14.94□□□□□ -0.02
SSSCA1O60232 SOX15-203ENST00000570788 1093 ntBASIC14.94□□□□□ -0.02
SSSCA1O60232 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC14.94□□□□□ -0.02
SSSCA1O60232 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC14.94□□□□□ -0.02
SSSCA1O60232 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC14.94□□□□□ -0.02
SSSCA1O60232 AC092118.2-201ENST00000613495 667 ntBASIC14.94□□□□□ -0.02
SSSCA1O60232 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms