Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RTL8CO15255 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC12.19□□□□□ -0.46
RTL8CO15255 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RTL8CO15255 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC12.19□□□□□ -0.46
RTL8CO15255 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC12.19□□□□□ -0.46
RTL8CO15255 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC12.19□□□□□ -0.46
RTL8CO15255 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC12.19□□□□□ -0.46
RTL8CO15255 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RTL8CO15255 AC116407.3-201ENST00000623905 1129 ntBASIC12.19□□□□□ -0.46
RTL8CO15255 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC12.19□□□□□ -0.46
RTL8CO15255 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTL8CO15255 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTL8CO15255 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTL8CO15255 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC12.19□□□□□ -0.46
RTL8CO15255 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC12.19□□□□□ -0.46
RTL8CO15255 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTL8CO15255 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RTL8CO15255 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTL8CO15255 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RTL8CO15255 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTL8CO15255 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RTL8CO15255 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RTL8CO15255 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RTL8CO15255 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RTL8CO15255 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
RTL8CO15255 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RTL8CO15255 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RTL8CO15255 FEM1AP3-201ENST00000403722 1741 ntBASIC12.18□□□□□ -0.46
RTL8CO15255 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
RTL8CO15255 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RTL8CO15255 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC12.18□□□□□ -0.46
RTL8CO15255 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RTL8CO15255 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RTL8CO15255 RCN1P2-201ENST00000398357 915 ntBASIC12.18□□□□□ -0.46
RTL8CO15255 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RTL8CO15255 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC12.18□□□□□ -0.46
RTL8CO15255 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC12.18□□□□□ -0.46
RTL8CO15255 SCARNA2-201ENST00000458748 420 ntBASIC12.18□□□□□ -0.46
RTL8CO15255 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC12.18□□□□□ -0.46
RTL8CO15255 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC12.18□□□□□ -0.46
RTL8CO15255 AL691403.2-201ENST00000618460 490 ntBASIC12.18□□□□□ -0.46
RTL8CO15255 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RTL8CO15255 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RTL8CO15255 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RTL8CO15255 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
RTL8CO15255 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
RTL8CO15255 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RTL8CO15255 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RTL8CO15255 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RTL8CO15255 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC12.18□□□□□ -0.46
RTL8CO15255 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
RTL8CO15255 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RTL8CO15255 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC12.18□□□□□ -0.46
RTL8CO15255 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
RTL8CO15255 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC12.18□□□□□ -0.46
RTL8CO15255 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC12.18□□□□□ -0.46
RTL8CO15255 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RTL8CO15255 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
RTL8CO15255 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTL8CO15255 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTL8CO15255 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC12.17□□□□□ -0.46
RTL8CO15255 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
RTL8CO15255 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTL8CO15255 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC12.17□□□□□ -0.46
RTL8CO15255 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC12.17□□□□□ -0.46
RTL8CO15255 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTL8CO15255 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTL8CO15255 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RTL8CO15255 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
RTL8CO15255 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RTL8CO15255 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RTL8CO15255 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
RTL8CO15255 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RTL8CO15255 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RTL8CO15255 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
RTL8CO15255 CCS-201ENST00000310190 942 ntTSL 5 BASIC12.17□□□□□ -0.46
RTL8CO15255 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTL8CO15255 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC12.17□□□□□ -0.46
RTL8CO15255 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC12.17□□□□□ -0.46
RTL8CO15255 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTL8CO15255 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
RTL8CO15255 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RTL8CO15255 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC12.17□□□□□ -0.46
RTL8CO15255 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC12.17□□□□□ -0.46
RTL8CO15255 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTL8CO15255 PGAM5P1-201ENST00000518923 814 ntBASIC12.17□□□□□ -0.46
RTL8CO15255 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC12.17□□□□□ -0.46
RTL8CO15255 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC12.17□□□□□ -0.46
RTL8CO15255 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTL8CO15255 MTDHP3-201ENST00000594186 672 ntBASIC12.17□□□□□ -0.46
RTL8CO15255 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC12.17□□□□□ -0.46
RTL8CO15255 CAND2-206ENST00000626378 333 ntTSL 5 BASIC12.17□□□□□ -0.46
RTL8CO15255 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RTL8CO15255 AL158211.5-201ENST00000623583 2518 ntBASIC12.17□□□□□ -0.46
RTL8CO15255 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC12.17□□□□□ -0.46
RTL8CO15255 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
RTL8CO15255 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTL8CO15255 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC12.17□□□□□ -0.46
RTL8CO15255 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
RTL8CO15255 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms