Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NDUFA1O15239 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
NDUFA1O15239 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC12.56□□□□□ -0.4
NDUFA1O15239 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NDUFA1O15239 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NDUFA1O15239 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NDUFA1O15239 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
NDUFA1O15239 AC084018.2-201ENST00000613093 2607 ntBASIC12.56□□□□□ -0.4
NDUFA1O15239 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
NDUFA1O15239 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NDUFA1O15239 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NDUFA1O15239 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
NDUFA1O15239 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFA1O15239 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFA1O15239 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFA1O15239 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
NDUFA1O15239 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC12.55□□□□□ -0.4
NDUFA1O15239 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFA1O15239 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
NDUFA1O15239 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC12.55□□□□□ -0.4
NDUFA1O15239 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC12.55□□□□□ -0.4
NDUFA1O15239 NFYC-AS1-201ENST00000606277 1687 ntBASIC12.55□□□□□ -0.4
NDUFA1O15239 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC12.55□□□□□ -0.4
NDUFA1O15239 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFA1O15239 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
NDUFA1O15239 AC106820.2-201ENST00000563775 3264 ntBASIC12.55□□□□□ -0.4
NDUFA1O15239 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFA1O15239 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFA1O15239 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFA1O15239 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFA1O15239 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFA1O15239 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
NDUFA1O15239 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFA1O15239 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFA1O15239 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
NDUFA1O15239 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
NDUFA1O15239 THEM4-205ENST00000489410 643 ntTSL 2 BASIC12.55□□□□□ -0.4
NDUFA1O15239 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC12.55□□□□□ -0.4
NDUFA1O15239 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFA1O15239 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC12.55□□□□□ -0.4
NDUFA1O15239 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFA1O15239 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFA1O15239 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFA1O15239 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFA1O15239 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFA1O15239 FER1L4-210ENST00000615531 5998 ntBASIC12.55□□□□□ -0.4
NDUFA1O15239 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
NDUFA1O15239 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFA1O15239 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFA1O15239 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFA1O15239 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC12.55□□□□□ -0.4
NDUFA1O15239 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFA1O15239 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFA1O15239 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFA1O15239 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFA1O15239 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
NDUFA1O15239 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFA1O15239 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC12.55□□□□□ -0.4
NDUFA1O15239 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFA1O15239 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFA1O15239 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
NDUFA1O15239 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC12.55□□□□□ -0.4
NDUFA1O15239 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
NDUFA1O15239 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
NDUFA1O15239 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NDUFA1O15239 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
NDUFA1O15239 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
NDUFA1O15239 AD000864.1-201ENST00000624076 2295 ntBASIC12.54□□□□□ -0.4
NDUFA1O15239 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NDUFA1O15239 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
NDUFA1O15239 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC12.54□□□□□ -0.4
NDUFA1O15239 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
NDUFA1O15239 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
NDUFA1O15239 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
NDUFA1O15239 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
NDUFA1O15239 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC12.54□□□□□ -0.4
NDUFA1O15239 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
NDUFA1O15239 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NDUFA1O15239 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC12.54□□□□□ -0.4
NDUFA1O15239 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NDUFA1O15239 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
NDUFA1O15239 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NDUFA1O15239 KRT17P3-201ENST00000420566 1262 ntBASIC12.54□□□□□ -0.4
NDUFA1O15239 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
NDUFA1O15239 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NDUFA1O15239 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC12.54□□□□□ -0.4
NDUFA1O15239 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NDUFA1O15239 C1QL1P1-201ENST00000568105 661 ntBASIC12.54□□□□□ -0.4
NDUFA1O15239 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
NDUFA1O15239 GAMT-205ENST00000640762 751 ntTSL 5 BASIC12.54□□□□□ -0.4
NDUFA1O15239 RCC2P6-201ENST00000526625 1557 ntBASIC12.54□□□□□ -0.4
NDUFA1O15239 PKD1P5-201ENST00000532415 10291 ntBASIC12.54□□□□□ -0.4
NDUFA1O15239 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC12.54□□□□□ -0.4
NDUFA1O15239 AC108860.2-201ENST00000562760 2183 ntBASIC12.54□□□□□ -0.4
NDUFA1O15239 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
NDUFA1O15239 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
NDUFA1O15239 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
NDUFA1O15239 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NDUFA1O15239 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC12.54□□□□□ -0.4
NDUFA1O15239 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms