Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDC7O00311 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.99■□□□□ 0.47
CDC7O00311 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDC7O00311 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CDC7O00311 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDC7O00311 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDC7O00311 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDC7O00311 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDC7O00311 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.99■□□□□ 0.47
CDC7O00311 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CDC7O00311 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.99■□□□□ 0.47
CDC7O00311 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CDC7O00311 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDC7O00311 AC009947.2-201ENST00000444014 672 ntBASIC17.99■□□□□ 0.47
CDC7O00311 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.99■□□□□ 0.47
CDC7O00311 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.99■□□□□ 0.47
CDC7O00311 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.99■□□□□ 0.47
CDC7O00311 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.99■□□□□ 0.47
CDC7O00311 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDC7O00311 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDC7O00311 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CDC7O00311 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDC7O00311 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDC7O00311 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDC7O00311 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDC7O00311 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDC7O00311 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.98■□□□□ 0.47
CDC7O00311 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.98■□□□□ 0.47
CDC7O00311 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDC7O00311 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDC7O00311 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.98■□□□□ 0.47
CDC7O00311 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CDC7O00311 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CDC7O00311 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDC7O00311 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.98■□□□□ 0.47
CDC7O00311 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.98■□□□□ 0.47
CDC7O00311 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.98■□□□□ 0.47
CDC7O00311 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.98■□□□□ 0.47
CDC7O00311 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.98■□□□□ 0.47
CDC7O00311 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.98■□□□□ 0.47
CDC7O00311 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.98■□□□□ 0.47
CDC7O00311 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.98■□□□□ 0.47
CDC7O00311 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.98■□□□□ 0.47
CDC7O00311 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDC7O00311 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.98■□□□□ 0.47
CDC7O00311 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.98■□□□□ 0.47
CDC7O00311 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDC7O00311 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDC7O00311 PCDHB18P-201ENST00000524813 2368 ntBASIC17.98■□□□□ 0.47
CDC7O00311 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDC7O00311 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDC7O00311 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDC7O00311 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDC7O00311 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.98■□□□□ 0.47
CDC7O00311 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDC7O00311 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDC7O00311 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDC7O00311 LINC01126-201ENST00000623515 1646 ntBASIC17.98■□□□□ 0.47
CDC7O00311 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CDC7O00311 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDC7O00311 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDC7O00311 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDC7O00311 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.97■□□□□ 0.47
CDC7O00311 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDC7O00311 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDC7O00311 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDC7O00311 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDC7O00311 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.97■□□□□ 0.47
CDC7O00311 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.97■□□□□ 0.47
CDC7O00311 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.97■□□□□ 0.47
CDC7O00311 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.97■□□□□ 0.47
CDC7O00311 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.97■□□□□ 0.47
CDC7O00311 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.97■□□□□ 0.47
CDC7O00311 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDC7O00311 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CDC7O00311 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
CDC7O00311 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDC7O00311 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDC7O00311 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDC7O00311 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDC7O00311 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.96■□□□□ 0.47
CDC7O00311 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDC7O00311 LINC01568-207ENST00000641790 1380 ntBASIC17.96■□□□□ 0.47
CDC7O00311 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDC7O00311 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.96■□□□□ 0.47
CDC7O00311 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDC7O00311 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDC7O00311 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDC7O00311 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.96■□□□□ 0.47
CDC7O00311 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDC7O00311 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDC7O00311 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDC7O00311 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.96■□□□□ 0.47
CDC7O00311 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.96■□□□□ 0.47
CDC7O00311 SEC1P-202ENST00000473944 940 ntBASIC17.96■□□□□ 0.47
CDC7O00311 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDC7O00311 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.96■□□□□ 0.47
CDC7O00311 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.96■□□□□ 0.47
CDC7O00311 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.96■□□□□ 0.47
CDC7O00311 AC010240.3-201ENST00000607688 395 ntBASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms