Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC188H7C350 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC188H7C350 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC188H7C350 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC188H7C350 AC008622.2-201ENST00000617006 1229 ntBASIC19.07■□□□□ 0.64
CCDC188H7C350 AC130371.2-201ENST00000619443 611 ntBASIC19.07■□□□□ 0.64
CCDC188H7C350 AL031985.4-201ENST00000642138 673 ntBASIC19.07■□□□□ 0.64
CCDC188H7C350 AC012313.1-201ENST00000593393 3059 ntBASIC19.07■□□□□ 0.64
CCDC188H7C350 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC188H7C350 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC188H7C350 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC188H7C350 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC188H7C350 KRT16P1-201ENST00000399124 1418 ntBASIC19.07■□□□□ 0.64
CCDC188H7C350 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC188H7C350 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CCDC188H7C350 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
CCDC188H7C350 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CCDC188H7C350 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC188H7C350 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC188H7C350 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC188H7C350 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CCDC188H7C350 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
CCDC188H7C350 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CCDC188H7C350 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC188H7C350 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC188H7C350 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC188H7C350 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.06■□□□□ 0.64
CCDC188H7C350 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC188H7C350 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CCDC188H7C350 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC188H7C350 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC188H7C350 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC188H7C350 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CCDC188H7C350 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC188H7C350 MCCD1P1-208ENST00000445732 328 ntBASIC19.06■□□□□ 0.64
CCDC188H7C350 AC008040.2-201ENST00000461049 708 ntBASIC19.06■□□□□ 0.64
CCDC188H7C350 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
CCDC188H7C350 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC188H7C350 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC188H7C350 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC188H7C350 AC093010.1-201ENST00000473625 1624 ntBASIC19.06■□□□□ 0.64
CCDC188H7C350 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC188H7C350 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC188H7C350 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC188H7C350 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC188H7C350 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC188H7C350 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC188H7C350 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC188H7C350 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC188H7C350 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
CCDC188H7C350 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC188H7C350 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC188H7C350 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC188H7C350 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC188H7C350 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CCDC188H7C350 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC188H7C350 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC188H7C350 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC188H7C350 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CCDC188H7C350 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC188H7C350 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC188H7C350 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC188H7C350 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC188H7C350 AL023284.2-201ENST00000405850 579 ntBASIC19.05■□□□□ 0.64
CCDC188H7C350 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.05■□□□□ 0.64
CCDC188H7C350 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.05■□□□□ 0.64
CCDC188H7C350 AC104771.1-201ENST00000603335 964 ntBASIC19.05■□□□□ 0.64
CCDC188H7C350 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC188H7C350 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC188H7C350 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
CCDC188H7C350 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CCDC188H7C350 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC188H7C350 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC188H7C350 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC188H7C350 PP12613-201ENST00000424958 2230 ntBASIC19.05■□□□□ 0.64
CCDC188H7C350 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC188H7C350 SDHAP2-201ENST00000455183 2001 ntBASIC19.05■□□□□ 0.64
CCDC188H7C350 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC188H7C350 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CCDC188H7C350 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC188H7C350 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CCDC188H7C350 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC188H7C350 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC188H7C350 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CCDC188H7C350 AC141586.5-201ENST00000624546 2050 ntBASIC19.04■□□□□ 0.64
CCDC188H7C350 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC188H7C350 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC188H7C350 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC188H7C350 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC188H7C350 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC188H7C350 AL353807.1-201ENST00000427475 662 ntBASIC19.04■□□□□ 0.64
CCDC188H7C350 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC188H7C350 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC188H7C350 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
CCDC188H7C350 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CCDC188H7C350 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC188H7C350 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC188H7C350 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC188H7C350 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC188H7C350 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms