Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 PKD1P6-201ENST00000343738 4769 ntBASIC28.1■■■□□ 2.09
PLEKHD1A6NEE1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PLEKHD1A6NEE1 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC28.09■■■□□ 2.09
PLEKHD1A6NEE1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
PLEKHD1A6NEE1 PMP22-202ENST00000395936 816 ntTSL 3 BASIC28.09■■■□□ 2.09
PLEKHD1A6NEE1 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
PLEKHD1A6NEE1 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC28.09■■■□□ 2.09
PLEKHD1A6NEE1 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC28.09■■■□□ 2.09
PLEKHD1A6NEE1 DNAJB3-201ENST00000446806 729 ntBASIC28.09■■■□□ 2.09
PLEKHD1A6NEE1 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC28.09■■■□□ 2.09
PLEKHD1A6NEE1 MIR3687-2-201ENST00000577708 61 ntBASIC28.09■■■□□ 2.09
PLEKHD1A6NEE1 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC28.09■■■□□ 2.09
PLEKHD1A6NEE1 MIR3687-1-201ENST00000614492 61 ntBASIC28.09■■■□□ 2.09
PLEKHD1A6NEE1 AP000867.4-201ENST00000641616 219 ntBASIC28.09■■■□□ 2.09
PLEKHD1A6NEE1 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
PLEKHD1A6NEE1 LINC01126-201ENST00000623515 1646 ntBASIC28.09■■■□□ 2.09
PLEKHD1A6NEE1 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PLEKHD1A6NEE1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PLEKHD1A6NEE1 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
PLEKHD1A6NEE1 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PLEKHD1A6NEE1 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
PLEKHD1A6NEE1 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC28.08■■■□□ 2.09
PLEKHD1A6NEE1 AP002414.3-201ENST00000589352 1468 ntBASIC28.08■■■□□ 2.09
PLEKHD1A6NEE1 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
PLEKHD1A6NEE1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC28.08■■■□□ 2.09
PLEKHD1A6NEE1 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC28.08■■■□□ 2.09
PLEKHD1A6NEE1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC28.08■■■□□ 2.09
PLEKHD1A6NEE1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC28.08■■■□□ 2.09
PLEKHD1A6NEE1 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
PLEKHD1A6NEE1 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC28.08■■■□□ 2.09
PLEKHD1A6NEE1 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
PLEKHD1A6NEE1 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
PLEKHD1A6NEE1 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC28.08■■■□□ 2.09
PLEKHD1A6NEE1 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
PLEKHD1A6NEE1 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
PLEKHD1A6NEE1 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC28.08■■■□□ 2.09
PLEKHD1A6NEE1 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC28.08■■■□□ 2.09
PLEKHD1A6NEE1 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC28.08■■■□□ 2.09
PLEKHD1A6NEE1 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC28.08■■■□□ 2.09
PLEKHD1A6NEE1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
PLEKHD1A6NEE1 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
PLEKHD1A6NEE1 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
PLEKHD1A6NEE1 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC28.08■■■□□ 2.08
PLEKHD1A6NEE1 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC28.07■■■□□ 2.08
PLEKHD1A6NEE1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
PLEKHD1A6NEE1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
PLEKHD1A6NEE1 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
PLEKHD1A6NEE1 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
PLEKHD1A6NEE1 RPS8P6-201ENST00000426177 609 ntBASIC28.07■■■□□ 2.08
PLEKHD1A6NEE1 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC28.07■■■□□ 2.08
PLEKHD1A6NEE1 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC28.07■■■□□ 2.08
PLEKHD1A6NEE1 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC28.07■■■□□ 2.08
PLEKHD1A6NEE1 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC28.07■■■□□ 2.08
PLEKHD1A6NEE1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC28.07■■■□□ 2.08
PLEKHD1A6NEE1 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC28.07■■■□□ 2.08
PLEKHD1A6NEE1 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC28.07■■■□□ 2.08
PLEKHD1A6NEE1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
PLEKHD1A6NEE1 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC28.07■■■□□ 2.08
PLEKHD1A6NEE1 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
PLEKHD1A6NEE1 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
PLEKHD1A6NEE1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
PLEKHD1A6NEE1 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC28.06■■■□□ 2.08
PLEKHD1A6NEE1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
PLEKHD1A6NEE1 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
PLEKHD1A6NEE1 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
PLEKHD1A6NEE1 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC28.06■■■□□ 2.08
PLEKHD1A6NEE1 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
PLEKHD1A6NEE1 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC28.06■■■□□ 2.08
PLEKHD1A6NEE1 AC004832.2-201ENST00000426397 482 ntBASIC28.06■■■□□ 2.08
PLEKHD1A6NEE1 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC28.06■■■□□ 2.08
PLEKHD1A6NEE1 SRP19-202ENST00000445150 833 ntTSL 2 BASIC28.06■■■□□ 2.08
PLEKHD1A6NEE1 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC28.06■■■□□ 2.08
PLEKHD1A6NEE1 AC004967.1-201ENST00000453589 447 ntBASIC28.06■■■□□ 2.08
PLEKHD1A6NEE1 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC28.06■■■□□ 2.08
PLEKHD1A6NEE1 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC28.06■■■□□ 2.08
PLEKHD1A6NEE1 HS6ST1P1-201ENST00000481504 1234 ntBASIC28.06■■■□□ 2.08
PLEKHD1A6NEE1 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
PLEKHD1A6NEE1 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC28.06■■■□□ 2.08
PLEKHD1A6NEE1 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
PLEKHD1A6NEE1 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC28.06■■■□□ 2.08
PLEKHD1A6NEE1 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
PLEKHD1A6NEE1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC28.06■■■□□ 2.08
PLEKHD1A6NEE1 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC28.06■■■□□ 2.08
PLEKHD1A6NEE1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC28.06■■■□□ 2.08
PLEKHD1A6NEE1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
PLEKHD1A6NEE1 AC093484.2-201ENST00000580996 2166 ntBASIC28.06■■■□□ 2.08
PLEKHD1A6NEE1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC28.05■■■□□ 2.08
PLEKHD1A6NEE1 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
PLEKHD1A6NEE1 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
PLEKHD1A6NEE1 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
PLEKHD1A6NEE1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
PLEKHD1A6NEE1 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC28.05■■■□□ 2.08
PLEKHD1A6NEE1 CD9-202ENST00000382515 1229 ntTSL 5 BASIC28.05■■■□□ 2.08
PLEKHD1A6NEE1 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
PLEKHD1A6NEE1 BID-204ENST00000399767 2129 ntTSL 2 BASIC28.05■■■□□ 2.08
PLEKHD1A6NEE1 KIRREL3-AS3-201ENST00000404882 831 ntBASIC28.05■■■□□ 2.08
PLEKHD1A6NEE1 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC28.05■■■□□ 2.08
PLEKHD1A6NEE1 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
PLEKHD1A6NEE1 AC112698.1-201ENST00000510299 916 ntBASIC28.05■■■□□ 2.08
PLEKHD1A6NEE1 RNA5SP416-201ENST00000516838 111 ntBASIC28.05■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms