Protein–RNA interactions for Protein: A6NCI4

VWA3A, von Willebrand factor A domain-containing protein 3A, humanhuman

Predictions only

Length 1,184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3AA6NCI4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VWA3AA6NCI4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.82■□□□□ 0.92
VWA3AA6NCI4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VWA3AA6NCI4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.82■□□□□ 0.92
VWA3AA6NCI4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.82■□□□□ 0.92
VWA3AA6NCI4 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
VWA3AA6NCI4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
VWA3AA6NCI4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
VWA3AA6NCI4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VWA3AA6NCI4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
VWA3AA6NCI4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.81■□□□□ 0.92
VWA3AA6NCI4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.81■□□□□ 0.92
VWA3AA6NCI4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
VWA3AA6NCI4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
VWA3AA6NCI4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
VWA3AA6NCI4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
VWA3AA6NCI4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
VWA3AA6NCI4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VWA3AA6NCI4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.81■□□□□ 0.92
VWA3AA6NCI4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VWA3AA6NCI4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VWA3AA6NCI4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VWA3AA6NCI4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VWA3AA6NCI4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VWA3AA6NCI4 ECEL1P3-201ENST00000427961 737 ntBASIC20.81■□□□□ 0.92
VWA3AA6NCI4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
VWA3AA6NCI4 SLC25A3P1-201ENST00000443844 931 ntBASIC20.81■□□□□ 0.92
VWA3AA6NCI4 SEC1P-202ENST00000473944 940 ntBASIC20.81■□□□□ 0.92
VWA3AA6NCI4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VWA3AA6NCI4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.81■□□□□ 0.92
VWA3AA6NCI4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.81■□□□□ 0.92
VWA3AA6NCI4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.81■□□□□ 0.92
VWA3AA6NCI4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
VWA3AA6NCI4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VWA3AA6NCI4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.81■□□□□ 0.92
VWA3AA6NCI4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.81■□□□□ 0.92
VWA3AA6NCI4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
VWA3AA6NCI4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VWA3AA6NCI4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
VWA3AA6NCI4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.81■□□□□ 0.92
VWA3AA6NCI4 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VWA3AA6NCI4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VWA3AA6NCI4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VWA3AA6NCI4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VWA3AA6NCI4 GMCL1P1-201ENST00000463439 1581 ntBASIC20.8■□□□□ 0.92
VWA3AA6NCI4 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VWA3AA6NCI4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
VWA3AA6NCI4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VWA3AA6NCI4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VWA3AA6NCI4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.8■□□□□ 0.92
VWA3AA6NCI4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.8■□□□□ 0.92
VWA3AA6NCI4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VWA3AA6NCI4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VWA3AA6NCI4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.8■□□□□ 0.92
VWA3AA6NCI4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.8■□□□□ 0.92
VWA3AA6NCI4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VWA3AA6NCI4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.8■□□□□ 0.92
VWA3AA6NCI4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.8■□□□□ 0.92
VWA3AA6NCI4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.8■□□□□ 0.92
VWA3AA6NCI4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.8■□□□□ 0.92
VWA3AA6NCI4 AC010240.3-201ENST00000607688 395 ntBASIC20.8■□□□□ 0.92
VWA3AA6NCI4 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VWA3AA6NCI4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
VWA3AA6NCI4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VWA3AA6NCI4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.8■□□□□ 0.92
VWA3AA6NCI4 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VWA3AA6NCI4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.8■□□□□ 0.92
VWA3AA6NCI4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VWA3AA6NCI4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.8■□□□□ 0.92
VWA3AA6NCI4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VWA3AA6NCI4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.8■□□□□ 0.92
VWA3AA6NCI4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.79■□□□□ 0.92
VWA3AA6NCI4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.79■□□□□ 0.92
VWA3AA6NCI4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
VWA3AA6NCI4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VWA3AA6NCI4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VWA3AA6NCI4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VWA3AA6NCI4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VWA3AA6NCI4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
VWA3AA6NCI4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VWA3AA6NCI4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VWA3AA6NCI4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
VWA3AA6NCI4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
VWA3AA6NCI4 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VWA3AA6NCI4 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VWA3AA6NCI4 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
VWA3AA6NCI4 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VWA3AA6NCI4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VWA3AA6NCI4 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VWA3AA6NCI4 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VWA3AA6NCI4 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VWA3AA6NCI4 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VWA3AA6NCI4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.79■□□□□ 0.92
VWA3AA6NCI4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.79■□□□□ 0.92
VWA3AA6NCI4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.79■□□□□ 0.92
VWA3AA6NCI4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.79■□□□□ 0.92
VWA3AA6NCI4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VWA3AA6NCI4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.79■□□□□ 0.92
VWA3AA6NCI4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.79■□□□□ 0.92
VWA3AA6NCI4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms