Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV5S1A1TA0A578 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV5S1A1TA0A578 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV5S1A1TA0A578 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TCRBV5S1A1TA0A578 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TCRBV5S1A1TA0A578 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TCRBV5S1A1TA0A578 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TCRBV5S1A1TA0A578 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TCRBV5S1A1TA0A578 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TCRBV5S1A1TA0A578 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.1■□□□□ 0.65
TCRBV5S1A1TA0A578 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TCRBV5S1A1TA0A578 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.1■□□□□ 0.65
TCRBV5S1A1TA0A578 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TCRBV5S1A1TA0A578 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TCRBV5S1A1TA0A578 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TCRBV5S1A1TA0A578 STARP1-201ENST00000397973 869 ntBASIC19.1■□□□□ 0.65
TCRBV5S1A1TA0A578 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.1■□□□□ 0.65
TCRBV5S1A1TA0A578 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TCRBV5S1A1TA0A578 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.1■□□□□ 0.65
TCRBV5S1A1TA0A578 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.1■□□□□ 0.65
TCRBV5S1A1TA0A578 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.1■□□□□ 0.65
TCRBV5S1A1TA0A578 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TCRBV5S1A1TA0A578 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.1■□□□□ 0.65
TCRBV5S1A1TA0A578 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TCRBV5S1A1TA0A578 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TCRBV5S1A1TA0A578 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.1■□□□□ 0.65
TCRBV5S1A1TA0A578 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV5S1A1TA0A578 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV5S1A1TA0A578 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV5S1A1TA0A578 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV5S1A1TA0A578 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TCRBV5S1A1TA0A578 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.09■□□□□ 0.65
TCRBV5S1A1TA0A578 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.09■□□□□ 0.65
TCRBV5S1A1TA0A578 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV5S1A1TA0A578 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV5S1A1TA0A578 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV5S1A1TA0A578 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
TCRBV5S1A1TA0A578 HLA-F-220ENST00000434407 884 ntBASIC19.09■□□□□ 0.65
TCRBV5S1A1TA0A578 ATP5G1P1-201ENST00000448724 379 ntBASIC19.09■□□□□ 0.65
TCRBV5S1A1TA0A578 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV5S1A1TA0A578 DUTP2-201ENST00000519164 463 ntBASIC19.09■□□□□ 0.65
TCRBV5S1A1TA0A578 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.09■□□□□ 0.65
TCRBV5S1A1TA0A578 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.09■□□□□ 0.65
TCRBV5S1A1TA0A578 AC140113.3-201ENST00000605663 199 ntBASIC19.09■□□□□ 0.65
TCRBV5S1A1TA0A578 LINC01023-201ENST00000606054 436 ntBASIC19.09■□□□□ 0.65
TCRBV5S1A1TA0A578 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV5S1A1TA0A578 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV5S1A1TA0A578 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV5S1A1TA0A578 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
TCRBV5S1A1TA0A578 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV5S1A1TA0A578 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV5S1A1TA0A578 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV5S1A1TA0A578 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV5S1A1TA0A578 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TCRBV5S1A1TA0A578 AL391807.1-203ENST00000604392 2365 ntBASIC19.08■□□□□ 0.65
TCRBV5S1A1TA0A578 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TCRBV5S1A1TA0A578 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TCRBV5S1A1TA0A578 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.08■□□□□ 0.65
TCRBV5S1A1TA0A578 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.08■□□□□ 0.65
TCRBV5S1A1TA0A578 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TCRBV5S1A1TA0A578 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
TCRBV5S1A1TA0A578 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.08■□□□□ 0.65
TCRBV5S1A1TA0A578 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TCRBV5S1A1TA0A578 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TCRBV5S1A1TA0A578 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TCRBV5S1A1TA0A578 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.08■□□□□ 0.64
TCRBV5S1A1TA0A578 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.08■□□□□ 0.64
TCRBV5S1A1TA0A578 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
TCRBV5S1A1TA0A578 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TCRBV5S1A1TA0A578 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.08■□□□□ 0.64
TCRBV5S1A1TA0A578 KRT18P57-201ENST00000443599 1254 ntBASIC19.08■□□□□ 0.64
TCRBV5S1A1TA0A578 AC034232.1-201ENST00000506026 1064 ntBASIC19.08■□□□□ 0.64
TCRBV5S1A1TA0A578 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.08■□□□□ 0.64
TCRBV5S1A1TA0A578 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TCRBV5S1A1TA0A578 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.08■□□□□ 0.64
TCRBV5S1A1TA0A578 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.08■□□□□ 0.64
TCRBV5S1A1TA0A578 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TCRBV5S1A1TA0A578 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TCRBV5S1A1TA0A578 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.08■□□□□ 0.64
TCRBV5S1A1TA0A578 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
TCRBV5S1A1TA0A578 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
TCRBV5S1A1TA0A578 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TCRBV5S1A1TA0A578 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.08■□□□□ 0.64
TCRBV5S1A1TA0A578 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
TCRBV5S1A1TA0A578 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TCRBV5S1A1TA0A578 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TCRBV5S1A1TA0A578 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TCRBV5S1A1TA0A578 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TCRBV5S1A1TA0A578 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TCRBV5S1A1TA0A578 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.08■□□□□ 0.64
TCRBV5S1A1TA0A578 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TCRBV5S1A1TA0A578 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV5S1A1TA0A578 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.07■□□□□ 0.64
TCRBV5S1A1TA0A578 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV5S1A1TA0A578 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV5S1A1TA0A578 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV5S1A1TA0A578 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TCRBV5S1A1TA0A578 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.07■□□□□ 0.64
TCRBV5S1A1TA0A578 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV5S1A1TA0A578 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms