Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 ELP6-205ENST00000439305 880 ntTSL 2 BASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 NAPSB-206ENST00000562112 1266 ntBASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 AL353719.1-201ENST00000566847 864 ntBASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 GLDC-219ENST00000640208 420 ntTSL 2 BASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 KRT8P45-201ENST00000414328 1447 ntBASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 AL499627.1-201ENST00000569373 2188 ntBASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 AC009113.1-201ENST00000570267 2443 ntBASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 AC036111.1-201ENST00000533973 1582 ntBASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 MIR564-202ENST00000385049 94 ntBASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 AP000593.1-201ENST00000393668 712 ntBASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 AP003041.3-201ENST00000527151 707 ntBASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 AC073592.3-201ENST00000625118 1834 ntBASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV4A0A0C4DH28 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV4A0A0C4DH28 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV4A0A0C4DH28 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TRGV4A0A0C4DH28 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV4A0A0C4DH28 MYLKP1-201ENST00000509077 1580 ntBASIC13.16□□□□□ -0.3
TRGV4A0A0C4DH28 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TRGV4A0A0C4DH28 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV4A0A0C4DH28 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV4A0A0C4DH28 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV4A0A0C4DH28 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TRGV4A0A0C4DH28 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV4A0A0C4DH28 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV4A0A0C4DH28 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV4A0A0C4DH28 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC13.16□□□□□ -0.3
TRGV4A0A0C4DH28 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV4A0A0C4DH28 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC13.16□□□□□ -0.3
TRGV4A0A0C4DH28 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
TRGV4A0A0C4DH28 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV4A0A0C4DH28 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV4A0A0C4DH28 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV4A0A0C4DH28 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV4A0A0C4DH28 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC13.16□□□□□ -0.3
TRGV4A0A0C4DH28 MMP23A-201ENST00000234610 1017 ntBASIC13.16□□□□□ -0.3
TRGV4A0A0C4DH28 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV4A0A0C4DH28 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC13.16□□□□□ -0.3
TRGV4A0A0C4DH28 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
TRGV4A0A0C4DH28 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV4A0A0C4DH28 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRGV4A0A0C4DH28 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC13.16□□□□□ -0.3
TRGV4A0A0C4DH28 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms