Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 PRORSD1P-202ENST00000563365 2154 ntBASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 AL645608.8-201ENST00000606034 2086 ntBASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 AP003097.1-201ENST00000530657 1135 ntBASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 AC092666.2-201ENST00000613287 246 ntBASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 AC009053.2-201ENST00000563701 2365 ntBASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV5A0A0B4J249 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 GAS7-202ENST00000396115 929 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 AC239809.2-201ENST00000415381 517 ntBASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 AC142086.2-201ENST00000569753 217 ntBASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 AC104771.1-201ENST00000603335 964 ntBASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV5A0A0B4J249 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV5A0A0B4J249 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms