Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC13.33□□□□□ -0.28
TRGV1A0A0A0MS02 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRGV1A0A0A0MS02 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRGV1A0A0A0MS02 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC13.33□□□□□ -0.28
TRGV1A0A0A0MS02 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
TRGV1A0A0A0MS02 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC13.33□□□□□ -0.28
TRGV1A0A0A0MS02 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 MYLKP1-201ENST00000509077 1580 ntBASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 AC007613.1-201ENST00000572811 2597 ntBASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 PRR31-201ENST00000371629 978 ntTSL 2 BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 MIR4674-201ENST00000582457 87 ntBASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 GLDC-219ENST00000640208 420 ntTSL 2 BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 EFTUD1P1-204ENST00000560401 1798 ntBASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRGV1A0A0A0MS02 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 AP000593.1-201ENST00000393668 712 ntBASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 AC128688.1-201ENST00000487626 519 ntBASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 NAPSB-206ENST00000562112 1266 ntBASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 AL023803.3-201ENST00000615559 522 ntBASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC13.31□□□□□ -0.28
TRGV1A0A0A0MS02 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms