Protein–RNA interactions for Protein: Q9Y6R1

SLC4A4, Electrogenic sodium bicarbonate cotransporter 1, humanhuman

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A4Q9Y6R1 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC4A4Q9Y6R1 AC073592.3-201ENST00000625118 1834 ntBASIC21.82■■□□□ 1.08
SLC4A4Q9Y6R1 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.82■■□□□ 1.08
SLC4A4Q9Y6R1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SLC4A4Q9Y6R1 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC4A4Q9Y6R1 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC4A4Q9Y6R1 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SLC4A4Q9Y6R1 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.81■■□□□ 1.08
SLC4A4Q9Y6R1 AP002383.4-201ENST00000442518 975 ntBASIC21.81■■□□□ 1.08
SLC4A4Q9Y6R1 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SLC4A4Q9Y6R1 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC21.81■■□□□ 1.08
SLC4A4Q9Y6R1 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC4A4Q9Y6R1 AC092119.3-201ENST00000612618 583 ntBASIC21.81■■□□□ 1.08
SLC4A4Q9Y6R1 AC004263.2-201ENST00000617183 678 ntBASIC21.81■■□□□ 1.08
SLC4A4Q9Y6R1 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.81■■□□□ 1.08
SLC4A4Q9Y6R1 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.81■■□□□ 1.08
SLC4A4Q9Y6R1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SLC4A4Q9Y6R1 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SLC4A4Q9Y6R1 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC4A4Q9Y6R1 NARF-204ENST00000390006 1766 ntTSL 2 BASIC21.81■■□□□ 1.08
SLC4A4Q9Y6R1 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC4A4Q9Y6R1 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.81■■□□□ 1.08
SLC4A4Q9Y6R1 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC4A4Q9Y6R1 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC4A4Q9Y6R1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC4A4Q9Y6R1 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.8■■□□□ 1.08
SLC4A4Q9Y6R1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
SLC4A4Q9Y6R1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC4A4Q9Y6R1 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC21.8■■□□□ 1.08
SLC4A4Q9Y6R1 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC21.8■■□□□ 1.08
SLC4A4Q9Y6R1 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC4A4Q9Y6R1 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC21.8■■□□□ 1.08
SLC4A4Q9Y6R1 CHCHD2P8-201ENST00000429873 447 ntBASIC21.8■■□□□ 1.08
SLC4A4Q9Y6R1 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.8■■□□□ 1.08
SLC4A4Q9Y6R1 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21.8■■□□□ 1.08
SLC4A4Q9Y6R1 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC21.8■■□□□ 1.08
SLC4A4Q9Y6R1 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21.8■■□□□ 1.08
SLC4A4Q9Y6R1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC4A4Q9Y6R1 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SLC4A4Q9Y6R1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC4A4Q9Y6R1 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC4A4Q9Y6R1 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SLC4A4Q9Y6R1 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SLC4A4Q9Y6R1 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC4A4Q9Y6R1 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC4A4Q9Y6R1 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SLC4A4Q9Y6R1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
SLC4A4Q9Y6R1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC4A4Q9Y6R1 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SLC4A4Q9Y6R1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.79■■□□□ 1.08
SLC4A4Q9Y6R1 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SLC4A4Q9Y6R1 AL353692.3-201ENST00000407031 1396 ntBASIC21.79■■□□□ 1.08
SLC4A4Q9Y6R1 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC4A4Q9Y6R1 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
SLC4A4Q9Y6R1 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC4A4Q9Y6R1 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC4A4Q9Y6R1 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SLC4A4Q9Y6R1 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SLC4A4Q9Y6R1 HCG4P8-203ENST00000443049 980 ntBASIC21.79■■□□□ 1.08
SLC4A4Q9Y6R1 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SLC4A4Q9Y6R1 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.79■■□□□ 1.08
SLC4A4Q9Y6R1 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC21.79■■□□□ 1.08
SLC4A4Q9Y6R1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC4A4Q9Y6R1 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC4A4Q9Y6R1 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC4A4Q9Y6R1 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC4A4Q9Y6R1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC4A4Q9Y6R1 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
SLC4A4Q9Y6R1 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC4A4Q9Y6R1 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC4A4Q9Y6R1 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SLC4A4Q9Y6R1 GMCL1P1-201ENST00000463439 1581 ntBASIC21.78■■□□□ 1.08
SLC4A4Q9Y6R1 AL138781.2-201ENST00000617896 1843 ntBASIC21.78■■□□□ 1.08
SLC4A4Q9Y6R1 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.78■■□□□ 1.08
SLC4A4Q9Y6R1 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC4A4Q9Y6R1 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SLC4A4Q9Y6R1 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SLC4A4Q9Y6R1 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC21.78■■□□□ 1.08
SLC4A4Q9Y6R1 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.78■■□□□ 1.08
SLC4A4Q9Y6R1 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC21.78■■□□□ 1.08
SLC4A4Q9Y6R1 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC21.78■■□□□ 1.08
SLC4A4Q9Y6R1 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SLC4A4Q9Y6R1 MIR3180-1-201ENST00000580374 94 ntBASIC21.78■■□□□ 1.08
SLC4A4Q9Y6R1 MIR3180-3-201ENST00000584616 94 ntBASIC21.78■■□□□ 1.08
SLC4A4Q9Y6R1 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.78■■□□□ 1.08
SLC4A4Q9Y6R1 AP002414.4-201ENST00000589764 1148 ntBASIC21.78■■□□□ 1.08
SLC4A4Q9Y6R1 AC008687.5-201ENST00000593746 558 ntBASIC21.78■■□□□ 1.08
SLC4A4Q9Y6R1 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SLC4A4Q9Y6R1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SLC4A4Q9Y6R1 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC4A4Q9Y6R1 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC4A4Q9Y6R1 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC4A4Q9Y6R1 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SLC4A4Q9Y6R1 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SLC4A4Q9Y6R1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SLC4A4Q9Y6R1 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC4A4Q9Y6R1 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC4A4Q9Y6R1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SLC4A4Q9Y6R1 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC4A4Q9Y6R1 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms