Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN16Q9Y5I7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN16Q9Y5I7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN16Q9Y5I7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN16Q9Y5I7 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN16Q9Y5I7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.03■□□□□ 0.32
CLDN16Q9Y5I7 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.03■□□□□ 0.32
CLDN16Q9Y5I7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.03■□□□□ 0.32
CLDN16Q9Y5I7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN16Q9Y5I7 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN16Q9Y5I7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.03■□□□□ 0.32
CLDN16Q9Y5I7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.03■□□□□ 0.32
CLDN16Q9Y5I7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.03■□□□□ 0.32
CLDN16Q9Y5I7 GPR32P1-201ENST00000601788 811 ntBASIC17.03■□□□□ 0.32
CLDN16Q9Y5I7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.03■□□□□ 0.32
CLDN16Q9Y5I7 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN16Q9Y5I7 AC132938.6-201ENST00000623828 1655 ntBASIC17.03■□□□□ 0.32
CLDN16Q9Y5I7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CLDN16Q9Y5I7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN16Q9Y5I7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
CLDN16Q9Y5I7 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN16Q9Y5I7 AC016734.2-201ENST00000624325 1377 ntBASIC17.02■□□□□ 0.32
CLDN16Q9Y5I7 BICD1-207ENST00000551848 1962 ntBASIC17.02■□□□□ 0.32
CLDN16Q9Y5I7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN16Q9Y5I7 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.02■□□□□ 0.32
CLDN16Q9Y5I7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN16Q9Y5I7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CLDN16Q9Y5I7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN16Q9Y5I7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN16Q9Y5I7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN16Q9Y5I7 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN16Q9Y5I7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN16Q9Y5I7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.02■□□□□ 0.32
CLDN16Q9Y5I7 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.02■□□□□ 0.32
CLDN16Q9Y5I7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CLDN16Q9Y5I7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.02■□□□□ 0.32
CLDN16Q9Y5I7 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.02■□□□□ 0.32
CLDN16Q9Y5I7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.02■□□□□ 0.32
CLDN16Q9Y5I7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CLDN16Q9Y5I7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.02■□□□□ 0.32
CLDN16Q9Y5I7 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CLDN16Q9Y5I7 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.02■□□□□ 0.32
CLDN16Q9Y5I7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CLDN16Q9Y5I7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN16Q9Y5I7 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN16Q9Y5I7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CLDN16Q9Y5I7 AC093010.1-201ENST00000473625 1624 ntBASIC17.02■□□□□ 0.31
CLDN16Q9Y5I7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
CLDN16Q9Y5I7 AL353692.3-201ENST00000407031 1396 ntBASIC17.02■□□□□ 0.31
CLDN16Q9Y5I7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.02■□□□□ 0.31
CLDN16Q9Y5I7 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CLDN16Q9Y5I7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
CLDN16Q9Y5I7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN16Q9Y5I7 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CLDN16Q9Y5I7 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.01■□□□□ 0.31
CLDN16Q9Y5I7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN16Q9Y5I7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN16Q9Y5I7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN16Q9Y5I7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CLDN16Q9Y5I7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CLDN16Q9Y5I7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CLDN16Q9Y5I7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN16Q9Y5I7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN16Q9Y5I7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.01■□□□□ 0.31
CLDN16Q9Y5I7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN16Q9Y5I7 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.01■□□□□ 0.31
CLDN16Q9Y5I7 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.01■□□□□ 0.31
CLDN16Q9Y5I7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN16Q9Y5I7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.01■□□□□ 0.31
CLDN16Q9Y5I7 TSPY22P-201ENST00000427496 604 ntBASIC17.01■□□□□ 0.31
CLDN16Q9Y5I7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN16Q9Y5I7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.01■□□□□ 0.31
CLDN16Q9Y5I7 KRT8P26-201ENST00000534154 1276 ntBASIC17.01■□□□□ 0.31
CLDN16Q9Y5I7 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.01■□□□□ 0.31
CLDN16Q9Y5I7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.01■□□□□ 0.31
CLDN16Q9Y5I7 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.01■□□□□ 0.31
CLDN16Q9Y5I7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN16Q9Y5I7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN16Q9Y5I7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN16Q9Y5I7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN16Q9Y5I7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN16Q9Y5I7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
CLDN16Q9Y5I7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN16Q9Y5I7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN16Q9Y5I7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.01■□□□□ 0.31
CLDN16Q9Y5I7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.01■□□□□ 0.31
CLDN16Q9Y5I7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.01■□□□□ 0.31
CLDN16Q9Y5I7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN16Q9Y5I7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CLDN16Q9Y5I7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLDN16Q9Y5I7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN16Q9Y5I7 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLDN16Q9Y5I7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CLDN16Q9Y5I7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN16Q9Y5I7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17■□□□□ 0.31
CLDN16Q9Y5I7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17■□□□□ 0.31
CLDN16Q9Y5I7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CLDN16Q9Y5I7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN16Q9Y5I7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLDN16Q9Y5I7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms