Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 AC140113.3-201ENST00000605663 199 ntBASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 AC005332.1-201ENST00000577698 1310 ntBASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA4Q9Y5G9 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA4Q9Y5G9 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA4Q9Y5G9 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA4Q9Y5G9 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA4Q9Y5G9 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA4Q9Y5G9 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA4Q9Y5G9 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA4Q9Y5G9 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA4Q9Y5G9 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PCDHGA4Q9Y5G9 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA4Q9Y5G9 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHGA4Q9Y5G9 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA4Q9Y5G9 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA4Q9Y5G9 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.12■□□□□ 0.49
PCDHGA4Q9Y5G9 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA4Q9Y5G9 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHGA4Q9Y5G9 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA4Q9Y5G9 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA4Q9Y5G9 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHGA4Q9Y5G9 AL441883.1-201ENST00000566170 1045 ntBASIC18.12■□□□□ 0.49
PCDHGA4Q9Y5G9 RN7SL718P-201ENST00000581254 303 ntBASIC18.12■□□□□ 0.49
PCDHGA4Q9Y5G9 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
PCDHGA4Q9Y5G9 PRORSD1P-202ENST00000563365 2154 ntBASIC18.12■□□□□ 0.49
PCDHGA4Q9Y5G9 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA4Q9Y5G9 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
PCDHGA4Q9Y5G9 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA4Q9Y5G9 KRT8P3-201ENST00000519669 1449 ntBASIC18.12■□□□□ 0.49
PCDHGA4Q9Y5G9 AC124067.4-201ENST00000519691 2379 ntBASIC18.12■□□□□ 0.49
PCDHGA4Q9Y5G9 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA4Q9Y5G9 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PCDHGA4Q9Y5G9 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHGA4Q9Y5G9 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA4Q9Y5G9 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA4Q9Y5G9 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.12■□□□□ 0.49
PCDHGA4Q9Y5G9 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
PCDHGA4Q9Y5G9 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA4Q9Y5G9 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA4Q9Y5G9 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA4Q9Y5G9 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA4Q9Y5G9 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA4Q9Y5G9 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGA4Q9Y5G9 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA4Q9Y5G9 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGA4Q9Y5G9 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGA4Q9Y5G9 CLEC4GP1-201ENST00000596555 870 ntBASIC18.11■□□□□ 0.49
PCDHGA4Q9Y5G9 AC008622.2-201ENST00000617006 1229 ntBASIC18.11■□□□□ 0.49
PCDHGA4Q9Y5G9 AC116407.4-201ENST00000623319 1061 ntBASIC18.11■□□□□ 0.49
PCDHGA4Q9Y5G9 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.11■□□□□ 0.49
PCDHGA4Q9Y5G9 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA4Q9Y5G9 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA4Q9Y5G9 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PCDHGA4Q9Y5G9 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
PCDHGA4Q9Y5G9 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PCDHGA4Q9Y5G9 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA4Q9Y5G9 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PCDHGA4Q9Y5G9 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA4Q9Y5G9 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDHGA4Q9Y5G9 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGA4Q9Y5G9 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA4Q9Y5G9 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA4Q9Y5G9 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA4Q9Y5G9 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms