Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP4S1Q9Y587 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
AP4S1Q9Y587 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
AP4S1Q9Y587 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
AP4S1Q9Y587 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP4S1Q9Y587 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.36■□□□□ 0.37
AP4S1Q9Y587 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.36■□□□□ 0.37
AP4S1Q9Y587 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.36■□□□□ 0.37
AP4S1Q9Y587 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP4S1Q9Y587 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
AP4S1Q9Y587 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
AP4S1Q9Y587 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
AP4S1Q9Y587 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP4S1Q9Y587 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP4S1Q9Y587 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP4S1Q9Y587 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.36■□□□□ 0.37
AP4S1Q9Y587 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
AP4S1Q9Y587 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP4S1Q9Y587 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
AP4S1Q9Y587 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.36■□□□□ 0.37
AP4S1Q9Y587 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
AP4S1Q9Y587 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
AP4S1Q9Y587 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
AP4S1Q9Y587 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP4S1Q9Y587 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.36■□□□□ 0.37
AP4S1Q9Y587 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP4S1Q9Y587 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
AP4S1Q9Y587 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP4S1Q9Y587 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP4S1Q9Y587 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP4S1Q9Y587 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP4S1Q9Y587 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.35■□□□□ 0.37
AP4S1Q9Y587 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
AP4S1Q9Y587 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP4S1Q9Y587 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP4S1Q9Y587 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP4S1Q9Y587 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP4S1Q9Y587 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.35■□□□□ 0.37
AP4S1Q9Y587 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
AP4S1Q9Y587 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP4S1Q9Y587 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP4S1Q9Y587 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.35■□□□□ 0.37
AP4S1Q9Y587 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.35■□□□□ 0.37
AP4S1Q9Y587 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.35■□□□□ 0.37
AP4S1Q9Y587 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.35■□□□□ 0.37
AP4S1Q9Y587 AL121829.2-201ENST00000620908 328 ntBASIC17.35■□□□□ 0.37
AP4S1Q9Y587 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
AP4S1Q9Y587 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
AP4S1Q9Y587 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
AP4S1Q9Y587 KRT8P41-201ENST00000533985 1514 ntBASIC17.35■□□□□ 0.37
AP4S1Q9Y587 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.35■□□□□ 0.37
AP4S1Q9Y587 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.35■□□□□ 0.37
AP4S1Q9Y587 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
AP4S1Q9Y587 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP4S1Q9Y587 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP4S1Q9Y587 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP4S1Q9Y587 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.35■□□□□ 0.37
AP4S1Q9Y587 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP4S1Q9Y587 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.34■□□□□ 0.37
AP4S1Q9Y587 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP4S1Q9Y587 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP4S1Q9Y587 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP4S1Q9Y587 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP4S1Q9Y587 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP4S1Q9Y587 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP4S1Q9Y587 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.34■□□□□ 0.37
AP4S1Q9Y587 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
AP4S1Q9Y587 BX276092.2-201ENST00000417668 665 ntBASIC17.34■□□□□ 0.37
AP4S1Q9Y587 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.34■□□□□ 0.37
AP4S1Q9Y587 AC006015.1-201ENST00000429970 570 ntBASIC17.34■□□□□ 0.37
AP4S1Q9Y587 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP4S1Q9Y587 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.34■□□□□ 0.37
AP4S1Q9Y587 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.34■□□□□ 0.37
AP4S1Q9Y587 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.34■□□□□ 0.37
AP4S1Q9Y587 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.34■□□□□ 0.37
AP4S1Q9Y587 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
AP4S1Q9Y587 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP4S1Q9Y587 AC133552.2-202ENST00000575694 574 ntBASIC17.34■□□□□ 0.37
AP4S1Q9Y587 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.34■□□□□ 0.37
AP4S1Q9Y587 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
AP4S1Q9Y587 HLA-A-209ENST00000638375 975 ntBASIC17.34■□□□□ 0.37
AP4S1Q9Y587 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP4S1Q9Y587 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP4S1Q9Y587 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP4S1Q9Y587 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
AP4S1Q9Y587 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP4S1Q9Y587 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP4S1Q9Y587 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.33■□□□□ 0.37
AP4S1Q9Y587 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
AP4S1Q9Y587 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP4S1Q9Y587 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP4S1Q9Y587 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
AP4S1Q9Y587 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.33■□□□□ 0.37
AP4S1Q9Y587 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP4S1Q9Y587 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP4S1Q9Y587 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP4S1Q9Y587 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.33■□□□□ 0.37
AP4S1Q9Y587 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
AP4S1Q9Y587 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP4S1Q9Y587 KRT8P3-201ENST00000519669 1449 ntBASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms