Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
NINLQ9Y2I6 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC24.99■■□□□ 1.59
NINLQ9Y2I6 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC24.99■■□□□ 1.59
NINLQ9Y2I6 IGHV3OR16-7-201ENST00000604106 360 ntBASIC24.99■■□□□ 1.59
NINLQ9Y2I6 AC117500.6-201ENST00000624871 588 ntBASIC24.99■■□□□ 1.59
NINLQ9Y2I6 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC24.99■■□□□ 1.59
NINLQ9Y2I6 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC24.99■■□□□ 1.59
NINLQ9Y2I6 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC24.99■■□□□ 1.59
NINLQ9Y2I6 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC24.99■■□□□ 1.59
NINLQ9Y2I6 TNXA-203ENST00000507684 2038 ntBASIC24.99■■□□□ 1.59
NINLQ9Y2I6 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
NINLQ9Y2I6 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
NINLQ9Y2I6 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
NINLQ9Y2I6 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC24.98■■□□□ 1.59
NINLQ9Y2I6 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC24.98■■□□□ 1.59
NINLQ9Y2I6 AC114341.1-201ENST00000618070 349 ntBASIC24.98■■□□□ 1.59
NINLQ9Y2I6 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC24.98■■□□□ 1.59
NINLQ9Y2I6 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
NINLQ9Y2I6 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC24.98■■□□□ 1.59
NINLQ9Y2I6 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC24.98■■□□□ 1.59
NINLQ9Y2I6 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
NINLQ9Y2I6 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
NINLQ9Y2I6 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC24.98■■□□□ 1.59
NINLQ9Y2I6 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC24.97■■□□□ 1.59
NINLQ9Y2I6 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC24.97■■□□□ 1.59
NINLQ9Y2I6 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
NINLQ9Y2I6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC24.97■■□□□ 1.59
NINLQ9Y2I6 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
NINLQ9Y2I6 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
NINLQ9Y2I6 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC24.97■■□□□ 1.59
NINLQ9Y2I6 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC24.97■■□□□ 1.59
NINLQ9Y2I6 BMF-207ENST00000559701 630 ntTSL 3 BASIC24.97■■□□□ 1.59
NINLQ9Y2I6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
NINLQ9Y2I6 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
NINLQ9Y2I6 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
NINLQ9Y2I6 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
NINLQ9Y2I6 AC098818.2-201ENST00000564925 2320 ntBASIC24.97■■□□□ 1.59
NINLQ9Y2I6 AC073592.3-201ENST00000625118 1834 ntBASIC24.97■■□□□ 1.59
NINLQ9Y2I6 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
NINLQ9Y2I6 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC24.96■■□□□ 1.59
NINLQ9Y2I6 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
NINLQ9Y2I6 KRT18P13-201ENST00000400056 1290 ntBASIC24.96■■□□□ 1.59
NINLQ9Y2I6 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC24.96■■□□□ 1.59
NINLQ9Y2I6 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC24.96■■□□□ 1.59
NINLQ9Y2I6 POM121L3P-201ENST00000419331 1163 ntBASIC24.96■■□□□ 1.59
NINLQ9Y2I6 AC068472.1-201ENST00000474589 881 ntBASIC24.96■■□□□ 1.59
NINLQ9Y2I6 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
NINLQ9Y2I6 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC24.96■■□□□ 1.59
NINLQ9Y2I6 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
NINLQ9Y2I6 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
NINLQ9Y2I6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
NINLQ9Y2I6 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
NINLQ9Y2I6 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC24.96■■□□□ 1.59
NINLQ9Y2I6 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
NINLQ9Y2I6 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC24.96■■□□□ 1.59
NINLQ9Y2I6 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
NINLQ9Y2I6 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC24.95■■□□□ 1.59
NINLQ9Y2I6 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.59
NINLQ9Y2I6 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
NINLQ9Y2I6 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
NINLQ9Y2I6 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
NINLQ9Y2I6 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
NINLQ9Y2I6 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC24.95■■□□□ 1.59
NINLQ9Y2I6 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC24.95■■□□□ 1.59
NINLQ9Y2I6 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC24.95■■□□□ 1.59
NINLQ9Y2I6 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
NINLQ9Y2I6 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
NINLQ9Y2I6 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.59
NINLQ9Y2I6 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
NINLQ9Y2I6 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
NINLQ9Y2I6 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
NINLQ9Y2I6 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC24.95■■□□□ 1.58
NINLQ9Y2I6 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
NINLQ9Y2I6 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC24.95■■□□□ 1.58
NINLQ9Y2I6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
NINLQ9Y2I6 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC24.95■■□□□ 1.58
NINLQ9Y2I6 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
NINLQ9Y2I6 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
NINLQ9Y2I6 AP000974.1-201ENST00000623909 2387 ntBASIC24.94■■□□□ 1.58
NINLQ9Y2I6 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC24.94■■□□□ 1.58
NINLQ9Y2I6 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
NINLQ9Y2I6 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
NINLQ9Y2I6 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
NINLQ9Y2I6 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC24.94■■□□□ 1.58
NINLQ9Y2I6 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
NINLQ9Y2I6 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
NINLQ9Y2I6 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
NINLQ9Y2I6 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
NINLQ9Y2I6 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
NINLQ9Y2I6 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
NINLQ9Y2I6 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
NINLQ9Y2I6 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
NINLQ9Y2I6 GMCL1P1-201ENST00000463439 1581 ntBASIC24.94■■□□□ 1.58
NINLQ9Y2I6 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC24.94■■□□□ 1.58
NINLQ9Y2I6 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC24.94■■□□□ 1.58
NINLQ9Y2I6 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
NINLQ9Y2I6 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC24.93■■□□□ 1.58
NINLQ9Y2I6 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
NINLQ9Y2I6 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
NINLQ9Y2I6 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms