Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 AC140878.1-201ENST00000565277 250 ntBASIC7.47□□□□□ -1.21
MACF1Q9UPN3 PRR29-204ENST00000577953 565 ntTSL 4 BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 AC244093.1-201ENST00000610837 814 ntBASIC7.47□□□□□ -1.21
MACF1Q9UPN3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 AL162274.1-201ENST00000617191 1098 ntBASIC7.47□□□□□ -1.21
MACF1Q9UPN3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 KRT8P7-201ENST00000533003 1432 ntBASIC7.47□□□□□ -1.21
MACF1Q9UPN3 KRT8P19-201ENST00000551916 1455 ntBASIC7.47□□□□□ -1.21
MACF1Q9UPN3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 AC099343.3-201ENST00000605834 2503 ntBASIC7.47□□□□□ -1.21
MACF1Q9UPN3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 HINT2P1-201ENST00000419438 481 ntBASIC7.47□□□□□ -1.21
MACF1Q9UPN3 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 MIR7845-201ENST00000618396 99 ntBASIC7.47□□□□□ -1.21
MACF1Q9UPN3 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 MIR4259-201ENST00000584466 101 ntBASIC7.47□□□□□ -1.21
MACF1Q9UPN3 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 AL512343.1-201ENST00000605837 169 ntBASIC7.47□□□□□ -1.21
MACF1Q9UPN3 MIR6775-201ENST00000617557 69 ntBASIC7.47□□□□□ -1.21
MACF1Q9UPN3 AP001271.2-201ENST00000624018 1556 ntBASIC7.47□□□□□ -1.21
MACF1Q9UPN3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC7.46□□□□□ -1.21
MACF1Q9UPN3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
MACF1Q9UPN3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.21
MACF1Q9UPN3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
MACF1Q9UPN3 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
MACF1Q9UPN3 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
MACF1Q9UPN3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.21
MACF1Q9UPN3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC7.46□□□□□ -1.21
MACF1Q9UPN3 AP005482.1-201ENST00000563722 1273 ntBASIC7.46□□□□□ -1.21
MACF1Q9UPN3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
MACF1Q9UPN3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC7.46□□□□□ -1.21
MACF1Q9UPN3 KRT89P-201ENST00000620027 1478 ntBASIC7.46□□□□□ -1.21
MACF1Q9UPN3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
MACF1Q9UPN3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC7.46□□□□□ -1.21
MACF1Q9UPN3 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
MACF1Q9UPN3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC7.46□□□□□ -1.21
MACF1Q9UPN3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
MACF1Q9UPN3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.21
MACF1Q9UPN3 SERF2-206ENST00000409291 807 ntTSL 3 BASIC7.46□□□□□ -1.21
MACF1Q9UPN3 FUZ-207ENST00000526575 482 ntTSL 4 BASIC7.46□□□□□ -1.21
MACF1Q9UPN3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC7.46□□□□□ -1.21
MACF1Q9UPN3 AC140912.1-201ENST00000577171 1054 ntBASIC7.46□□□□□ -1.21
MACF1Q9UPN3 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC7.46□□□□□ -1.21
MACF1Q9UPN3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC7.46□□□□□ -1.21
MACF1Q9UPN3 C1orf229-201ENST00000623686 2258 ntBASIC7.46□□□□□ -1.21
MACF1Q9UPN3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC7.46□□□□□ -1.22
MACF1Q9UPN3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC7.46□□□□□ -1.22
MACF1Q9UPN3 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC7.46□□□□□ -1.22
MACF1Q9UPN3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
MACF1Q9UPN3 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
MACF1Q9UPN3 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC7.46□□□□□ -1.22
MACF1Q9UPN3 AL355334.1-201ENST00000417713 215 ntBASIC7.46□□□□□ -1.22
MACF1Q9UPN3 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
MACF1Q9UPN3 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC7.46□□□□□ -1.22
MACF1Q9UPN3 IGHV3-42-201ENST00000520410 361 ntBASIC7.46□□□□□ -1.22
MACF1Q9UPN3 AC010654.1-201ENST00000615722 808 ntBASIC7.46□□□□□ -1.22
MACF1Q9UPN3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
MACF1Q9UPN3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC7.46□□□□□ -1.22
MACF1Q9UPN3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
MACF1Q9UPN3 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC7.46□□□□□ -1.22
MACF1Q9UPN3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
MACF1Q9UPN3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
MACF1Q9UPN3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
MACF1Q9UPN3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
MACF1Q9UPN3 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC7.46□□□□□ -1.22
MACF1Q9UPN3 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC7.46□□□□□ -1.22
MACF1Q9UPN3 BAD-207ENST00000544785 525 ntTSL 3 BASIC7.46□□□□□ -1.22
MACF1Q9UPN3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC7.46□□□□□ -1.22
MACF1Q9UPN3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC7.46□□□□□ -1.22
MACF1Q9UPN3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC7.46□□□□□ -1.22
MACF1Q9UPN3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC7.46□□□□□ -1.22
MACF1Q9UPN3 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
MACF1Q9UPN3 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC7.46□□□□□ -1.22
MACF1Q9UPN3 KRT223P-202ENST00000449164 1292 ntBASIC7.46□□□□□ -1.22
MACF1Q9UPN3 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
MACF1Q9UPN3 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC7.46□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms