Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NPIPA1Q9UND3 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NPIPA1Q9UND3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NPIPA1Q9UND3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
NPIPA1Q9UND3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.93■□□□□ 0.3
NPIPA1Q9UND3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
NPIPA1Q9UND3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
NPIPA1Q9UND3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NPIPA1Q9UND3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NPIPA1Q9UND3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NPIPA1Q9UND3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
NPIPA1Q9UND3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NPIPA1Q9UND3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
NPIPA1Q9UND3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NPIPA1Q9UND3 PKD1P1-201ENST00000458669 6805 ntBASIC16.93■□□□□ 0.3
NPIPA1Q9UND3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
NPIPA1Q9UND3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
NPIPA1Q9UND3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPIPA1Q9UND3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.92■□□□□ 0.3
NPIPA1Q9UND3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPIPA1Q9UND3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPIPA1Q9UND3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPIPA1Q9UND3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
NPIPA1Q9UND3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.92■□□□□ 0.3
NPIPA1Q9UND3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.92■□□□□ 0.3
NPIPA1Q9UND3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.92■□□□□ 0.3
NPIPA1Q9UND3 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.92■□□□□ 0.3
NPIPA1Q9UND3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
NPIPA1Q9UND3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.92■□□□□ 0.3
NPIPA1Q9UND3 AC011498.5-201ENST00000592027 486 ntBASIC16.92■□□□□ 0.3
NPIPA1Q9UND3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.92■□□□□ 0.3
NPIPA1Q9UND3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
NPIPA1Q9UND3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.92■□□□□ 0.3
NPIPA1Q9UND3 AC012313.10-201ENST00000623509 926 ntBASIC16.92■□□□□ 0.3
NPIPA1Q9UND3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPIPA1Q9UND3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPIPA1Q9UND3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPIPA1Q9UND3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPIPA1Q9UND3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPIPA1Q9UND3 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPIPA1Q9UND3 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPIPA1Q9UND3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPIPA1Q9UND3 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NPIPA1Q9UND3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.92■□□□□ 0.3
NPIPA1Q9UND3 Z98044.1-201ENST00000632503 1764 ntBASIC16.92■□□□□ 0.3
NPIPA1Q9UND3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.92■□□□□ 0.3
NPIPA1Q9UND3 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPIPA1Q9UND3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPIPA1Q9UND3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
NPIPA1Q9UND3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NPIPA1Q9UND3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NPIPA1Q9UND3 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPIPA1Q9UND3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPIPA1Q9UND3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NPIPA1Q9UND3 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPIPA1Q9UND3 AC093525.10-201ENST00000625130 1569 ntBASIC16.91■□□□□ 0.3
NPIPA1Q9UND3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
NPIPA1Q9UND3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NPIPA1Q9UND3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NPIPA1Q9UND3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.91■□□□□ 0.3
NPIPA1Q9UND3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NPIPA1Q9UND3 BX276092.5-203ENST00000456199 560 ntBASIC16.91■□□□□ 0.3
NPIPA1Q9UND3 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.91■□□□□ 0.3
NPIPA1Q9UND3 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.91■□□□□ 0.3
NPIPA1Q9UND3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.91■□□□□ 0.3
NPIPA1Q9UND3 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPIPA1Q9UND3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPIPA1Q9UND3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.91■□□□□ 0.3
NPIPA1Q9UND3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.91■□□□□ 0.3
NPIPA1Q9UND3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NPIPA1Q9UND3 AL512353.2-201ENST00000448759 1962 ntBASIC16.91■□□□□ 0.3
NPIPA1Q9UND3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPIPA1Q9UND3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.91■□□□□ 0.3
NPIPA1Q9UND3 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPIPA1Q9UND3 AL138781.2-201ENST00000617896 1843 ntBASIC16.91■□□□□ 0.3
NPIPA1Q9UND3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NPIPA1Q9UND3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPIPA1Q9UND3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.91■□□□□ 0.3
NPIPA1Q9UND3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA1Q9UND3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA1Q9UND3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA1Q9UND3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
NPIPA1Q9UND3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.9■□□□□ 0.3
NPIPA1Q9UND3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA1Q9UND3 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA1Q9UND3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.9■□□□□ 0.3
NPIPA1Q9UND3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.9■□□□□ 0.3
NPIPA1Q9UND3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA1Q9UND3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
NPIPA1Q9UND3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA1Q9UND3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
NPIPA1Q9UND3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.9■□□□□ 0.3
NPIPA1Q9UND3 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA1Q9UND3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA1Q9UND3 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA1Q9UND3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
NPIPA1Q9UND3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA1Q9UND3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA1Q9UND3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA1Q9UND3 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms