Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHA4Q9UN74 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHA4Q9UN74 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHA4Q9UN74 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHA4Q9UN74 NTF6B-201ENST00000591913 560 ntBASIC20.94■□□□□ 0.94
PCDHA4Q9UN74 AC083849.1-201ENST00000615227 514 ntBASIC20.94■□□□□ 0.94
PCDHA4Q9UN74 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHA4Q9UN74 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
PCDHA4Q9UN74 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDHA4Q9UN74 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PCDHA4Q9UN74 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHA4Q9UN74 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.94■□□□□ 0.94
PCDHA4Q9UN74 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHA4Q9UN74 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHA4Q9UN74 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHA4Q9UN74 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDHA4Q9UN74 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHA4Q9UN74 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHA4Q9UN74 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHA4Q9UN74 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDHA4Q9UN74 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHA4Q9UN74 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHA4Q9UN74 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.93■□□□□ 0.94
PCDHA4Q9UN74 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHA4Q9UN74 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHA4Q9UN74 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHA4Q9UN74 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.93■□□□□ 0.94
PCDHA4Q9UN74 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHA4Q9UN74 SPDYE13P-201ENST00000445314 798 ntBASIC20.93■□□□□ 0.94
PCDHA4Q9UN74 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.93■□□□□ 0.94
PCDHA4Q9UN74 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHA4Q9UN74 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.93■□□□□ 0.94
PCDHA4Q9UN74 AC024563.2-201ENST00000603282 481 ntBASIC20.93■□□□□ 0.94
PCDHA4Q9UN74 AL590326.2-201ENST00000625139 305 ntBASIC20.93■□□□□ 0.94
PCDHA4Q9UN74 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHA4Q9UN74 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDHA4Q9UN74 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
PCDHA4Q9UN74 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHA4Q9UN74 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHA4Q9UN74 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHA4Q9UN74 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA4Q9UN74 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDHA4Q9UN74 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDHA4Q9UN74 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDHA4Q9UN74 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA4Q9UN74 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA4Q9UN74 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA4Q9UN74 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDHA4Q9UN74 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA4Q9UN74 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA4Q9UN74 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA4Q9UN74 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA4Q9UN74 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDHA4Q9UN74 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.92■□□□□ 0.94
PCDHA4Q9UN74 VENTXP5-201ENST00000523979 775 ntBASIC20.92■□□□□ 0.94
PCDHA4Q9UN74 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.92■□□□□ 0.94
PCDHA4Q9UN74 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA4Q9UN74 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
PCDHA4Q9UN74 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDHA4Q9UN74 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
PCDHA4Q9UN74 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA4Q9UN74 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA4Q9UN74 AL354751.1-201ENST00000412768 1863 ntBASIC20.92■□□□□ 0.94
PCDHA4Q9UN74 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA4Q9UN74 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA4Q9UN74 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PCDHA4Q9UN74 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA4Q9UN74 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDHA4Q9UN74 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
PCDHA4Q9UN74 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.91■□□□□ 0.94
PCDHA4Q9UN74 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.91■□□□□ 0.94
PCDHA4Q9UN74 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHA4Q9UN74 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHA4Q9UN74 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHA4Q9UN74 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHA4Q9UN74 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHA4Q9UN74 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHA4Q9UN74 MIR662-201ENST00000384847 95 ntBASIC20.91■□□□□ 0.94
PCDHA4Q9UN74 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHA4Q9UN74 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PCDHA4Q9UN74 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.91■□□□□ 0.94
PCDHA4Q9UN74 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.91■□□□□ 0.94
PCDHA4Q9UN74 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHA4Q9UN74 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.91■□□□□ 0.94
PCDHA4Q9UN74 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.91■□□□□ 0.94
PCDHA4Q9UN74 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHA4Q9UN74 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.91■□□□□ 0.94
PCDHA4Q9UN74 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.91■□□□□ 0.94
PCDHA4Q9UN74 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHA4Q9UN74 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.91■□□□□ 0.94
PCDHA4Q9UN74 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
PCDHA4Q9UN74 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHA4Q9UN74 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHA4Q9UN74 ABALON-201ENST00000629058 1903 ntBASIC20.9■□□□□ 0.94
PCDHA4Q9UN74 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.9■□□□□ 0.94
PCDHA4Q9UN74 KRT89P-201ENST00000620027 1478 ntBASIC20.9■□□□□ 0.94
PCDHA4Q9UN74 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHA4Q9UN74 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHA4Q9UN74 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHA4Q9UN74 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms