Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EBF1Q9UH73 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
EBF1Q9UH73 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EBF1Q9UH73 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
EBF1Q9UH73 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
EBF1Q9UH73 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
EBF1Q9UH73 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
EBF1Q9UH73 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.68■□□□□ 0.58
EBF1Q9UH73 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
EBF1Q9UH73 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.68■□□□□ 0.58
EBF1Q9UH73 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EBF1Q9UH73 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EBF1Q9UH73 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.67■□□□□ 0.58
EBF1Q9UH73 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
EBF1Q9UH73 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.67■□□□□ 0.58
EBF1Q9UH73 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EBF1Q9UH73 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
EBF1Q9UH73 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.67■□□□□ 0.58
EBF1Q9UH73 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
EBF1Q9UH73 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.67■□□□□ 0.58
EBF1Q9UH73 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EBF1Q9UH73 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.67■□□□□ 0.58
EBF1Q9UH73 GPR32P1-201ENST00000601788 811 ntBASIC18.67■□□□□ 0.58
EBF1Q9UH73 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.67■□□□□ 0.58
EBF1Q9UH73 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
EBF1Q9UH73 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
EBF1Q9UH73 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.67■□□□□ 0.58
EBF1Q9UH73 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EBF1Q9UH73 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EBF1Q9UH73 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.67■□□□□ 0.58
EBF1Q9UH73 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EBF1Q9UH73 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
EBF1Q9UH73 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EBF1Q9UH73 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EBF1Q9UH73 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
EBF1Q9UH73 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EBF1Q9UH73 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EBF1Q9UH73 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EBF1Q9UH73 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
EBF1Q9UH73 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EBF1Q9UH73 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EBF1Q9UH73 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EBF1Q9UH73 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EBF1Q9UH73 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
EBF1Q9UH73 IGHV3-47-201ENST00000425060 335 ntBASIC18.66■□□□□ 0.58
EBF1Q9UH73 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.66■□□□□ 0.58
EBF1Q9UH73 KRT16P4-201ENST00000453883 522 ntBASIC18.66■□□□□ 0.58
EBF1Q9UH73 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.66■□□□□ 0.58
EBF1Q9UH73 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
EBF1Q9UH73 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.66■□□□□ 0.58
EBF1Q9UH73 AC138894.3-201ENST00000603787 634 ntBASIC18.66■□□□□ 0.58
EBF1Q9UH73 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.66■□□□□ 0.58
EBF1Q9UH73 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.66■□□□□ 0.58
EBF1Q9UH73 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
EBF1Q9UH73 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.66■□□□□ 0.58
EBF1Q9UH73 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
EBF1Q9UH73 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.66■□□□□ 0.58
EBF1Q9UH73 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.65■□□□□ 0.58
EBF1Q9UH73 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
EBF1Q9UH73 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EBF1Q9UH73 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EBF1Q9UH73 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
EBF1Q9UH73 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
EBF1Q9UH73 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.65■□□□□ 0.58
EBF1Q9UH73 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EBF1Q9UH73 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EBF1Q9UH73 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.65■□□□□ 0.58
EBF1Q9UH73 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EBF1Q9UH73 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.65■□□□□ 0.58
EBF1Q9UH73 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
EBF1Q9UH73 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
EBF1Q9UH73 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EBF1Q9UH73 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EBF1Q9UH73 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
EBF1Q9UH73 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EBF1Q9UH73 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
EBF1Q9UH73 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EBF1Q9UH73 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EBF1Q9UH73 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
EBF1Q9UH73 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EBF1Q9UH73 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EBF1Q9UH73 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
EBF1Q9UH73 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
EBF1Q9UH73 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
EBF1Q9UH73 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
EBF1Q9UH73 IRX1P1-201ENST00000438849 1838 ntBASIC18.65■□□□□ 0.58
EBF1Q9UH73 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.65■□□□□ 0.58
EBF1Q9UH73 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.65■□□□□ 0.58
EBF1Q9UH73 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
EBF1Q9UH73 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
EBF1Q9UH73 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
EBF1Q9UH73 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
EBF1Q9UH73 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
EBF1Q9UH73 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
EBF1Q9UH73 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
EBF1Q9UH73 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
EBF1Q9UH73 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
EBF1Q9UH73 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EBF1Q9UH73 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.64■□□□□ 0.57
EBF1Q9UH73 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms