Protein–RNA interactions for Protein: Q9UD57

NKX1-2, NK1 transcription factor-related protein 2, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-2Q9UD57 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NKX1-2Q9UD57 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NKX1-2Q9UD57 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.46■□□□□ 0.39
NKX1-2Q9UD57 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.46■□□□□ 0.39
NKX1-2Q9UD57 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.46■□□□□ 0.39
NKX1-2Q9UD57 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
NKX1-2Q9UD57 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.46■□□□□ 0.39
NKX1-2Q9UD57 LINC02228-203ENST00000641970 1355 ntBASIC17.46■□□□□ 0.39
NKX1-2Q9UD57 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NKX1-2Q9UD57 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.46■□□□□ 0.39
NKX1-2Q9UD57 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.46■□□□□ 0.39
NKX1-2Q9UD57 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
NKX1-2Q9UD57 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
NKX1-2Q9UD57 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NKX1-2Q9UD57 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
NKX1-2Q9UD57 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.45■□□□□ 0.38
NKX1-2Q9UD57 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX1-2Q9UD57 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NKX1-2Q9UD57 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NKX1-2Q9UD57 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NKX1-2Q9UD57 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX1-2Q9UD57 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.45■□□□□ 0.38
NKX1-2Q9UD57 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX1-2Q9UD57 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX1-2Q9UD57 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX1-2Q9UD57 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX1-2Q9UD57 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.45■□□□□ 0.38
NKX1-2Q9UD57 AC132872.4-202ENST00000622924 2756 ntBASIC17.45■□□□□ 0.38
NKX1-2Q9UD57 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.45■□□□□ 0.38
NKX1-2Q9UD57 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
NKX1-2Q9UD57 PBX2P1-201ENST00000493219 1291 ntBASIC17.45■□□□□ 0.38
NKX1-2Q9UD57 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.45■□□□□ 0.38
NKX1-2Q9UD57 AL136967.2-201ENST00000623968 743 ntBASIC17.45■□□□□ 0.38
NKX1-2Q9UD57 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
NKX1-2Q9UD57 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX1-2Q9UD57 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX1-2Q9UD57 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX1-2Q9UD57 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX1-2Q9UD57 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX1-2Q9UD57 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NKX1-2Q9UD57 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.45■□□□□ 0.38
NKX1-2Q9UD57 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX1-2Q9UD57 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.45■□□□□ 0.38
NKX1-2Q9UD57 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NKX1-2Q9UD57 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.45■□□□□ 0.38
NKX1-2Q9UD57 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NKX1-2Q9UD57 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX1-2Q9UD57 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
NKX1-2Q9UD57 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NKX1-2Q9UD57 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NKX1-2Q9UD57 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
NKX1-2Q9UD57 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.44■□□□□ 0.38
NKX1-2Q9UD57 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.44■□□□□ 0.38
NKX1-2Q9UD57 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NKX1-2Q9UD57 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NKX1-2Q9UD57 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NKX1-2Q9UD57 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NKX1-2Q9UD57 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
NKX1-2Q9UD57 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NKX1-2Q9UD57 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.44■□□□□ 0.38
NKX1-2Q9UD57 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NKX1-2Q9UD57 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.44■□□□□ 0.38
NKX1-2Q9UD57 EDA-201ENST00000338901 1233 ntBASIC17.44■□□□□ 0.38
NKX1-2Q9UD57 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NKX1-2Q9UD57 YBX1P10-201ENST00000444752 975 ntBASIC17.44■□□□□ 0.38
NKX1-2Q9UD57 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.44■□□□□ 0.38
NKX1-2Q9UD57 AC007322.4-201ENST00000509611 723 ntBASIC17.44■□□□□ 0.38
NKX1-2Q9UD57 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.44■□□□□ 0.38
NKX1-2Q9UD57 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.44■□□□□ 0.38
NKX1-2Q9UD57 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.44■□□□□ 0.38
NKX1-2Q9UD57 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
NKX1-2Q9UD57 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
NKX1-2Q9UD57 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NKX1-2Q9UD57 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.44■□□□□ 0.38
NKX1-2Q9UD57 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NKX1-2Q9UD57 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
NKX1-2Q9UD57 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NKX1-2Q9UD57 AL138688.1-201ENST00000624851 1594 ntBASIC17.44■□□□□ 0.38
NKX1-2Q9UD57 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.44■□□□□ 0.38
NKX1-2Q9UD57 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NKX1-2Q9UD57 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.44■□□□□ 0.38
NKX1-2Q9UD57 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NKX1-2Q9UD57 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.44■□□□□ 0.38
NKX1-2Q9UD57 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NKX1-2Q9UD57 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NKX1-2Q9UD57 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NKX1-2Q9UD57 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NKX1-2Q9UD57 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NKX1-2Q9UD57 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.43■□□□□ 0.38
NKX1-2Q9UD57 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NKX1-2Q9UD57 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NKX1-2Q9UD57 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NKX1-2Q9UD57 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NKX1-2Q9UD57 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NKX1-2Q9UD57 AC027612.3-201ENST00000413684 1047 ntBASIC17.43■□□□□ 0.38
NKX1-2Q9UD57 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.43■□□□□ 0.38
NKX1-2Q9UD57 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.43■□□□□ 0.38
NKX1-2Q9UD57 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NKX1-2Q9UD57 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
NKX1-2Q9UD57 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms